RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W SGS1P35187 1447 aa4.7□□□□□ -1.66
PTI1YGR156W GFA1P14742 717 aaKnown RBP4.69□□□□□ -1.66
PTI1YGR156W PEX2P32800 271 aa4.69□□□□□ -1.66
PTI1YGR156W CHZ1P40019 153 aaPredicted RBP4.69□□□□□ -1.66
PTI1YGR156W NUP82P40368 713 aa4.69□□□□□ -1.66
PTI1YGR156W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
PTI1YGR156W AMA1P50082 593 aa4.69□□□□□ -1.66
PTI1YGR156W MUP1P50276 574 aa4.69□□□□□ -1.66
PTI1YGR156W URA1P28272 314 aaPredicted RBP4.68□□□□□ -1.66
PTI1YGR156W HDA1P53973 706 aa4.68□□□□□ -1.66
PTI1YGR156W PKH1Q03407 766 aa4.68□□□□□ -1.66
PTI1YGR156W FLC1Q08967 793 aa4.68□□□□□ -1.66
PTI1YGR156W RPL8BP29453 256 aaKnown RBP4.67□□□□□ -1.66
PTI1YGR156W YBR184WP38299 523 aa4.67□□□□□ -1.66
PTI1YGR156W RSP5P39940 809 aaKnown RBP4.67□□□□□ -1.66
PTI1YGR156W TOK1P40310 691 aa4.67□□□□□ -1.66
PTI1YGR156W VHR1P40522 640 aa4.67□□□□□ -1.66
PTI1YGR156W PFD1P46988 109 aa4.67□□□□□ -1.66
PTI1YGR156W TIM54P47045 478 aa4.67□□□□□ -1.66
PTI1YGR156W FMP25Q08023 583 aa4.67□□□□□ -1.66
PTI1YGR156W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
PTI1YGR156W SPT6P23615 1451 aaKnown RBP4.67□□□□□ -1.66
PTI1YGR156W HCA4P20448 770 aaKnown RBP4.66□□□□□ -1.66
PTI1YGR156W TIM23P32897 222 aa4.66□□□□□ -1.66
PTI1YGR156W PPZ2P33329 710 aa4.66□□□□□ -1.66
PTI1YGR156W PZF1P39933 429 aa4.66□□□□□ -1.66
PTI1YGR156W HSL1P34244 1518 aa4.66□□□□□ -1.66
PTI1YGR156W MNN1P39106 762 aa4.65□□□□□ -1.67
PTI1YGR156W UTP8P53276 713 aaKnown RBP4.65□□□□□ -1.67
PTI1YGR156W POB3Q04636 552 aaKnown RBP4.65□□□□□ -1.67
PTI1YGR156W YPR071WQ12346 211 aa4.65□□□□□ -1.67
PTI1YGR156W CIT1P00890 479 aa4.64□□□□□ -1.67
PTI1YGR156W MET6P05694 767 aaKnown RBP4.64□□□□□ -1.67
PTI1YGR156W MPH2P0CD99 609 aa4.64□□□□□ -1.67
PTI1YGR156W PHO8P11491 566 aa4.64□□□□□ -1.67
PTI1YGR156W TDP1P38319 544 aa4.64□□□□□ -1.67
PTI1YGR156W PCL5P38794 229 aa4.64□□□□□ -1.67
PTI1YGR156W GGA2P38817 585 aaKnown RBP4.64□□□□□ -1.67
PTI1YGR156W YJL163CP46996 555 aa4.64□□□□□ -1.67
PTI1YGR156W YGL081WP53156 320 aa4.64□□□□□ -1.67
PTI1YGR156W RIA1P53893 1110 aa4.64□□□□□ -1.67
PTI1YGR156W BUL2Q03758 920 aaKnown RBP4.64□□□□□ -1.67
PTI1YGR156W SPO75Q07798 868 aa4.64□□□□□ -1.67
PTI1YGR156W YLR125WQ12138 136 aa4.64□□□□□ -1.67
PTI1YGR156W THO2P53552 1597 aaKnown RBP4.64□□□□□ -1.67
PTI1YGR156W BUD4P47136 1447 aa4.63□□□□□ -1.67
PTI1YGR156W CAN1P04817 590 aa4.63□□□□□ -1.67
PTI1YGR156W KIN3P22209 435 aa4.63□□□□□ -1.67
PTI1YGR156W CYS3P31373 394 aaKnown RBP4.63□□□□□ -1.67
PTI1YGR156W HBS1P32769 611 aaKnown RBP4.63□□□□□ -1.67
PTI1YGR156W ERT1P38140 529 aa4.63□□□□□ -1.67
PTI1YGR156W NIT3P49954 291 aa4.63□□□□□ -1.67
PTI1YGR156W NOG2P53742 486 aaKnown RBP4.63□□□□□ -1.67
PTI1YGR156W ASI2P53895 289 aa4.63□□□□□ -1.67
PTI1YGR156W TAF8Q03750 510 aa4.63□□□□□ -1.67
PTI1YGR156W UTP14Q04500 899 aaKnown RBP4.63□□□□□ -1.67
PTI1YGR156W ECM5Q03214 1411 aa4.63□□□□□ -1.67
PTI1YGR156W ERR1P0CX10 437 aa4.62□□□□□ -1.67
PTI1YGR156W ERR2P0CX11 437 aa4.62□□□□□ -1.67
PTI1YGR156W ILV6P25605 309 aaKnown RBP4.62□□□□□ -1.67
PTI1YGR156W ALR2P43553 858 aa4.62□□□□□ -1.67
PTI1YGR156W ATG36P46983 293 aa4.62□□□□□ -1.67
PTI1YGR156W VPS73P53142 486 aaKnown RBP4.62□□□□□ -1.67
PTI1YGR156W YGR125WP53273 1036 aa4.62□□□□□ -1.67
PTI1YGR156W MRPS35P53292 345 aa4.62□□□□□ -1.67
PTI1YGR156W DUS1P53759 423 aaKnown RBP4.62□□□□□ -1.67
PTI1YGR156W TUB1P09733 447 aaKnown RBP4.61□□□□□ -1.67
PTI1YGR156W GAL11P19659 1081 aa4.61□□□□□ -1.67
PTI1YGR156W HSP60P19882 572 aaKnown RBP4.61□□□□□ -1.67
PTI1YGR156W GRX4P32642 244 aa4.61□□□□□ -1.67
PTI1YGR156W YBR284WP38150 797 aa4.61□□□□□ -1.67
PTI1YGR156W YBR053CP38235 358 aa4.61□□□□□ -1.67
PTI1YGR156W UBP12P39538 1254 aa4.61□□□□□ -1.67
PTI1YGR156W YIR042CP40586 236 aa4.61□□□□□ -1.67
PTI1YGR156W YJR142WP47173 342 aa4.61□□□□□ -1.67
PTI1YGR156W HSV2P50079 448 aaPredicted RBP4.61□□□□□ -1.67
PTI1YGR156W RTA1P53047 317 aa4.61□□□□□ -1.67
PTI1YGR156W ERP6P53198 216 aa4.61□□□□□ -1.67
PTI1YGR156W NRG1Q03125 231 aa4.61□□□□□ -1.67
PTI1YGR156W UBX5Q06682 500 aa4.61□□□□□ -1.67
PTI1YGR156W OSH2Q12451 1283 aa4.61□□□□□ -1.67
PTI1YGR156W PRP4P20053 465 aaKnown RBP4.6□□□□□ -1.67
PTI1YGR156W MSH2P25847 964 aa4.6□□□□□ -1.67
PTI1YGR156W CBR1P38626 284 aaKnown RBP4.6□□□□□ -1.67
PTI1YGR156W TAH11P47112 604 aa4.6□□□□□ -1.67
PTI1YGR156W SSL2Q00578 843 aa4.6□□□□□ -1.67
PTI1YGR156W HAL9Q12180 1030 aa4.6□□□□□ -1.67
PTI1YGR156W SUT2Q12286 268 aa4.6□□□□□ -1.67
PTI1YGR156W THI4P32318 326 aa4.59□□□□□ -1.67
PTI1YGR156W HIS7P33734 552 aaKnown RBP4.59□□□□□ -1.67
PTI1YGR156W BET3P36149 193 aa4.59□□□□□ -1.67
PTI1YGR156W RIX1P38883 763 aaPredicted RBP4.59□□□□□ -1.67
PTI1YGR156W SAK1P38990 1142 aa4.59□□□□□ -1.67
PTI1YGR156W YIL166CP40445 542 aa4.59□□□□□ -1.67
PTI1YGR156W SSY5P47002 699 aa4.59□□□□□ -1.67
PTI1YGR156W MAL11P53048 616 aa4.59□□□□□ -1.67
PTI1YGR156W DAM1P53267 343 aa4.59□□□□□ -1.67
PTI1YGR156W MUS81Q04149 632 aaPredicted RBP4.59□□□□□ -1.67
PTI1YGR156W HOF1Q05080 669 aa4.59□□□□□ -1.67
PTI1YGR156W COQ11Q05892 277 aa4.59□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 83.3 ms