RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RAD2P07276 1031 aa3.1□□□□□ -1.91
PRE4YFR050C HOM2P13663 365 aaKnown RBP3.1□□□□□ -1.91
PRE4YFR050C CYC8P14922 966 aa3.1□□□□□ -1.91
PRE4YFR050C ECM32P32644 1121 aaKnown RBP3.1□□□□□ -1.91
PRE4YFR050C YGL140CP53120 1219 aa3.1□□□□□ -1.91
PRE4YFR050C STP1Q00947 519 aa3.1□□□□□ -1.91
PRE4YFR050C OYE2Q03558 400 aaKnown RBP3.1□□□□□ -1.91
PRE4YFR050C UTP5Q04177 643 aaKnown RBP3.1□□□□□ -1.91
PRE4YFR050C SPR28Q04921 423 aa3.1□□□□□ -1.91
PRE4YFR050C RTP1Q12751 981 aa3.1□□□□□ -1.91
PRE4YFR050C SSK22P25390 1331 aaPredicted RBP3.1□□□□□ -1.91
PRE4YFR050C STE4P18851 423 aa3.09□□□□□ -1.91
PRE4YFR050C SEC8P32855 1065 aa3.09□□□□□ -1.91
PRE4YFR050C ADD66P36040 267 aa3.09□□□□□ -1.91
PRE4YFR050C UBP5P39944 805 aa3.09□□□□□ -1.91
PRE4YFR050C FYV10P40492 516 aa3.09□□□□□ -1.91
PRE4YFR050C ALT1P52893 592 aa3.09□□□□□ -1.91
PRE4YFR050C CWC24P53769 259 aa3.09□□□□□ -1.91
PRE4YFR050C BUL2Q03758 920 aaKnown RBP3.09□□□□□ -1.91
PRE4YFR050C TPP1Q03796 238 aa3.09□□□□□ -1.91
PRE4YFR050C EST2Q06163 884 aa3.09□□□□□ -1.91
PRE4YFR050C ESF1Q06344 628 aaKnown RBP3.09□□□□□ -1.91
PRE4YFR050C UBX5Q06682 500 aa3.09□□□□□ -1.91
PRE4YFR050C MRL1Q06815 381 aa3.09□□□□□ -1.91
PRE4YFR050C ACK1Q07622 623 aaPredicted RBP3.09□□□□□ -1.91
PRE4YFR050C HRK1Q08732 759 aaKnown RBP3.09□□□□□ -1.91
PRE4YFR050C PNS1Q12412 539 aa3.09□□□□□ -1.91
PRE4YFR050C RRD2Q12461 358 aa3.09□□□□□ -1.91
PRE4YFR050C MOT1P32333 1867 aa3.08□□□□□ -1.92
PRE4YFR050C PRC1P00729 532 aa3.08□□□□□ -1.92
PRE4YFR050C TAF13P11747 167 aa3.08□□□□□ -1.92
PRE4YFR050C SEC23P15303 768 aaKnown RBP3.08□□□□□ -1.92
PRE4YFR050C PIC2P40035 300 aa3.08□□□□□ -1.92
PRE4YFR050C VPS53P47061 822 aa3.08□□□□□ -1.92
PRE4YFR050C SDH1Q00711 640 aa3.08□□□□□ -1.92
PRE4YFR050C RKM2Q03942 479 aa3.08□□□□□ -1.92
PRE4YFR050C RSA3Q05942 220 aaKnown RBP3.08□□□□□ -1.92
PRE4YFR050C YLR257WQ06146 321 aaKnown RBP3.08□□□□□ -1.92
PRE4YFR050C RRP15Q06511 250 aaPredicted RBP3.08□□□□□ -1.92
PRE4YFR050C BRE4Q07660 1125 aa3.08□□□□□ -1.92
PRE4YFR050C PUS7Q08647 676 aaKnown RBP3.08□□□□□ -1.92
PRE4YFR050C PMA1P05030 918 aaKnown RBP3.07□□□□□ -1.92
PRE4YFR050C GCD1P09032 578 aaPredicted RBP3.07□□□□□ -1.92
PRE4YFR050C PUB1P32588 453 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92 RIP-Chip
PRE4YFR050C TVP23P38962 199 aa3.07□□□□□ -1.92
PRE4YFR050C HDA2Q06629 674 aa3.07□□□□□ -1.92
PRE4YFR050C APE1P14904 514 aa3.06□□□□□ -1.92
PRE4YFR050C VMA2P16140 517 aaKnown RBP3.06□□□□□ -1.92
PRE4YFR050C YCL042WP25572 119 aa3.06□□□□□ -1.92
PRE4YFR050C RAD27P26793 382 aa3.06□□□□□ -1.92
PRE4YFR050C PET112P33893 541 aa3.06□□□□□ -1.92
PRE4YFR050C MIA40P36046 403 aa3.06□□□□□ -1.92
PRE4YFR050C MOB1P40484 314 aa3.06□□□□□ -1.92
PRE4YFR050C OPT1P40897 799 aa3.06□□□□□ -1.92
PRE4YFR050C RMD1Q03441 430 aa3.06□□□□□ -1.92
PRE4YFR050C MAG2Q06436 670 aaKnown RBP3.06□□□□□ -1.92
PRE4YFR050C ALE1Q08548 619 aa3.06□□□□□ -1.92
PRE4YFR050C TRE1Q08919 783 aa3.06□□□□□ -1.92
PRE4YFR050C YVC1Q12324 675 aa3.06□□□□□ -1.92
PRE4YFR050C PTC5Q12511 572 aa3.06□□□□□ -1.92
PRE4YFR050C GLT1Q12680 2145 aaKnown RBP3.06□□□□□ -1.92
PRE4YFR050C TUB2P02557 457 aaKnown RBP3.05□□□□□ -1.92
PRE4YFR050C HIS5P07172 385 aa3.05□□□□□ -1.92
PRE4YFR050C HEM13P11353 328 aaKnown RBP3.05□□□□□ -1.92
PRE4YFR050C PTP1P25044 335 aa3.05□□□□□ -1.92
PRE4YFR050C LCB1P25045 558 aaKnown RBP3.05□□□□□ -1.92
PRE4YFR050C ADP1P25371 1049 aa3.05□□□□□ -1.92
PRE4YFR050C PRO1P32264 428 aa3.05□□□□□ -1.92
PRE4YFR050C UTH1P36135 365 aa3.05□□□□□ -1.92
PRE4YFR050C ALG3P38179 458 aa3.05□□□□□ -1.92
PRE4YFR050C PAF1P38351 445 aa3.05□□□□□ -1.92
PRE4YFR050C YHL012WP38709 493 aa3.05□□□□□ -1.92
PRE4YFR050C QNS1P38795 714 aaKnown RBP3.05□□□□□ -1.92
PRE4YFR050C FMO1P38866 432 aa3.05□□□□□ -1.92
PRE4YFR050C AZR1P50080 613 aa3.05□□□□□ -1.92
PRE4YFR050C SIW14P53965 281 aa3.05□□□□□ -1.92
PRE4YFR050C ROD1Q02805 837 aa3.05□□□□□ -1.92
PRE4YFR050C SWI1P09547 1314 aa3.04□□□□□ -1.92
PRE4YFR050C SNF1P06782 633 aaKnown RBP3.04□□□□□ -1.92
PRE4YFR050C GCR1P07261 785 aa3.04□□□□□ -1.92
PRE4YFR050C HSF1P10961 833 aa3.04□□□□□ -1.92
PRE4YFR050C ACE2P21192 770 aa3.04□□□□□ -1.92
PRE4YFR050C MSH2P25847 964 aa3.04□□□□□ -1.92
PRE4YFR050C APL2P36000 726 aaPredicted RBP3.04□□□□□ -1.92
PRE4YFR050C YKR018CP36114 725 aa3.04□□□□□ -1.92
PRE4YFR050C PTC7P38797 343 aa3.04□□□□□ -1.92
PRE4YFR050C GTS1P40956 396 aa3.04□□□□□ -1.92
PRE4YFR050C TAF1P46677 1066 aa3.04□□□□□ -1.92
PRE4YFR050C PIB2P53191 635 aa3.04□□□□□ -1.92
PRE4YFR050C TAM41P53230 385 aa3.04□□□□□ -1.92
PRE4YFR050C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92 RIP-Chip
PRE4YFR050C IRC4Q03036 179 aa3.04□□□□□ -1.92
PRE4YFR050C SSY1Q03770 852 aa3.04□□□□□ -1.92
PRE4YFR050C NBA1Q08229 501 aaKnown RBP3.04□□□□□ -1.92
PRE4YFR050C SSP2Q08646 371 aa3.04□□□□□ -1.92
PRE4YFR050C COQ4O13525 335 aa3.03□□□□□ -1.92
PRE4YFR050C SYP1P25623 870 aaKnown RBP3.03□□□□□ -1.92
PRE4YFR050C MKK2P32491 506 aa3.03□□□□□ -1.92
PRE4YFR050C HSP78P33416 811 aa3.03□□□□□ -1.92
PRE4YFR050C POL12P38121 705 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms