RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C AZR1P50080 613 aa8.41□□□□□ -1.06
PUP3YER094C RPA49Q01080 415 aaPredicted RBP8.41□□□□□ -1.06
PUP3YER094C CWC21Q03375 135 aaKnown RBP8.41□□□□□ -1.06
PUP3YER094C IWR1Q07532 353 aaPredicted RBP8.41□□□□□ -1.06
PUP3YER094C RPL4AP10664 362 aaKnown RBP8.4□□□□□ -1.06
PUP3YER094C RAD57P25301 460 aa8.4□□□□□ -1.06
PUP3YER094C TRM2P33753 639 aa8.4□□□□□ -1.06
PUP3YER094C UIP5P36137 443 aa8.4□□□□□ -1.06
PUP3YER094C YMR124WP39523 943 aaKnown RBP8.4□□□□□ -1.06
PUP3YER094C HXT8P40886 569 aa8.4□□□□□ -1.06
PUP3YER094C CPR7P47103 393 aa8.4□□□□□ -1.06
PUP3YER094C CLA4P48562 842 aa8.4□□□□□ -1.06
PUP3YER094C RPL4BP49626 362 aaKnown RBP8.4□□□□□ -1.06
PUP3YER094C LAA1P39526 2014 aa8.39□□□□□ -1.07
PUP3YER094C CDC33P07260 213 aaKnown RBP8.39□□□□□ -1.07
PUP3YER094C IME1P21190 360 aa8.39□□□□□ -1.07
PUP3YER094C CDC11P32458 415 aa8.39□□□□□ -1.07
PUP3YER094C SRB4P32569 687 aa8.39□□□□□ -1.07
PUP3YER094C ALD5P40047 520 aaKnown RBP8.39□□□□□ -1.07
PUP3YER094C EFM4P40516 257 aa8.39□□□□□ -1.07
PUP3YER094C INP51P40559 946 aaKnown RBP8.39□□□□□ -1.07
PUP3YER094C AIM21P40563 679 aa8.39□□□□□ -1.07
PUP3YER094C STE20Q03497 939 aaKnown RBP8.39□□□□□ -1.07
PUP3YER094C SOV1Q04748 898 aa8.39□□□□□ -1.07
PUP3YER094C YLR001CQ07895 862 aa8.39□□□□□ -1.07
PUP3YER094C TRP2P00899 507 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C COX4P04037 155 aa8.38□□□□□ -1.07
PUP3YER094C ADE4P04046 510 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C SNF1P06782 633 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C ASP3-2P0CX77 362 aa8.38□□□□□ -1.07
PUP3YER094C ASP3-3P0CX78 362 aa8.38□□□□□ -1.07
PUP3YER094C ASP3-4P0CX79 362 aa8.38□□□□□ -1.07
PUP3YER094C ASP3-1P0CZ17 362 aa8.38□□□□□ -1.07
PUP3YER094C ADE2P21264 571 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C DAL2P25335 343 aa8.38□□□□□ -1.07
PUP3YER094C PRR1P28708 518 aa8.38□□□□□ -1.07
PUP3YER094C DRE2P36152 348 aa8.38□□□□□ -1.07
PUP3YER094C CCC2P38995 1004 aa8.38□□□□□ -1.07
PUP3YER094C NDC80P40460 691 aa8.38□□□□□ -1.07
PUP3YER094C SBE2P42223 864 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C LAM5P43560 674 aa8.38□□□□□ -1.07
PUP3YER094C SGM1P47166 707 aa8.38□□□□□ -1.07
PUP3YER094C HOS3Q02959 697 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C DOT1Q04089 582 aaKnown RBP8.38□□□□□ -1.07
PUP3YER094C VAC14Q06708 880 aa8.38□□□□□ -1.07
PUP3YER094C GIS3Q12418 502 aa8.38□□□□□ -1.07
PUP3YER094C GLN3P18494 730 aa8.37□□□□□ -1.07
PUP3YER094C RRT12P25381 491 aa8.37□□□□□ -1.07
PUP3YER094C BUD2P33314 1104 aa8.37□□□□□ -1.07
PUP3YER094C YKL050CP35736 922 aa8.37□□□□□ -1.07
PUP3YER094C TRZ1P36159 838 aaPredicted RBP8.37□□□□□ -1.07
PUP3YER094C TCD1P38756 429 aa8.37□□□□□ -1.07
PUP3YER094C DAS1P47005 663 aa8.37□□□□□ -1.07
PUP3YER094C YNL134CP53912 376 aaKnown RBP8.37□□□□□ -1.07
PUP3YER094C MUK1Q02866 612 aa8.37□□□□□ -1.07
PUP3YER094C VPS60Q03390 229 aa8.37□□□□□ -1.07
PUP3YER094C ABP140Q08641 628 aaKnown RBP8.37□□□□□ -1.07
PUP3YER094C DAS2Q12084 232 aa8.37□□□□□ -1.07
PUP3YER094C SGT2Q12118 346 aaKnown RBP8.37□□□□□ -1.07
PUP3YER094C MCM16Q12262 181 aa8.37□□□□□ -1.07
PUP3YER094C OSH2Q12451 1283 aa8.37□□□□□ -1.07
PUP3YER094C SPT2P06843 333 aaPredicted RBP8.36□□□□□ -1.07
PUP3YER094C CDC42P19073 191 aa8.36□□□□□ -1.07
PUP3YER094C COX11P19516 300 aaKnown RBP8.36□□□□□ -1.07
PUP3YER094C CKI1P20485 582 aa8.36□□□□□ -1.07
PUP3YER094C SEC21P32074 935 aaKnown RBP8.36□□□□□ -1.07
PUP3YER094C RPT1P33299 467 aaKnown RBP8.36□□□□□ -1.07
PUP3YER094C CSG2P35206 410 aa8.36□□□□□ -1.07
PUP3YER094C EXO5P38289 585 aa8.36□□□□□ -1.07
PUP3YER094C SET5P38890 526 aaKnown RBP8.36□□□□□ -1.07
PUP3YER094C ULI1P43604 169 aa8.36□□□□□ -1.07
PUP3YER094C ALT2P52892 507 aa8.36□□□□□ -1.07
PUP3YER094C YGR021WP53212 290 aa8.36□□□□□ -1.07
PUP3YER094C ALG11P53954 548 aaKnown RBP8.36□□□□□ -1.07
PUP3YER094C PPM1Q04081 328 aa8.36□□□□□ -1.07
PUP3YER094C SML1Q04964 104 aa8.36□□□□□ -1.07
PUP3YER094C YLR455WQ06188 304 aa8.36□□□□□ -1.07
PUP3YER094C PCD1Q12524 340 aa8.36□□□□□ -1.07
PUP3YER094C ECM3Q99252 613 aa8.36□□□□□ -1.07
PUP3YER094C HXT1P32465 570 aa8.35□□□□□ -1.07
PUP3YER094C AVT3P36062 692 aa8.35□□□□□ -1.07
PUP3YER094C REI1P38344 393 aaPredicted RBP8.35□□□□□ -1.07
PUP3YER094C TVP23P38962 199 aa8.35□□□□□ -1.07
PUP3YER094C PSY2P40164 858 aa8.35□□□□□ -1.07
PUP3YER094C VPS70P47161 811 aa8.35□□□□□ -1.07
PUP3YER094C ISM1P48526 1002 aa8.35□□□□□ -1.07
PUP3YER094C GCV2P49095 1034 aa8.35□□□□□ -1.07
PUP3YER094C DRN1P53255 507 aaKnown RBP8.35□□□□□ -1.07
PUP3YER094C YMR018WQ04364 514 aa8.35□□□□□ -1.07
PUP3YER094C PUS1Q12211 544 aaKnown RBP8.35□□□□□ -1.07
PUP3YER094C YDR524C-BQ3E6R4 66 aa8.35□□□□□ -1.07
PUP3YER094C AI5_BETAQ9ZZX0 354 aa8.35□□□□□ -1.07
PUP3YER094C GAL10P04397 699 aa8.34□□□□□ -1.07
PUP3YER094C PET111P08468 800 aa8.34□□□□□ -1.07
PUP3YER094C HEM1P09950 548 aaPredicted RBP8.34□□□□□ -1.07
PUP3YER094C FUB1P25659 250 aa8.34□□□□□ -1.07
PUP3YER094C POT1P27796 417 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
PUP3YER094C RRN6P32786 894 aa8.34□□□□□ -1.07
PUP3YER094C PTC4P38089 393 aa8.34□□□□□ -1.07
PUP3YER094C YHR054CP38780 354 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms