RNA–Protein interactions for RNA: YER052C

HOM3, Transcript of Aspartate kinase (L-aspartate 4-P-transferase), yeast

Gene HOM3, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM3	YER052C	ELG1	Q12050	791 aa		4.87	□□□□□ -1.63
HOM3	YER052C	APC2	Q12440	853 aa		4.87	□□□□□ -1.63
HOM3	YER052C	SEC7	P11075	2009 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	CHC1	P22137	1653 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	SEC3	P33332	1336 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	TUF1	P02992	437 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	SBP1	P10080	294 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	PRP9	P19736	530 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	MRPL25	P23369	157 aa		4.86	□□□□□ -1.63
HOM3	YER052C	ARE1	P25628	610 aa		4.86	□□□□□ -1.63
HOM3	YER052C	RPL8B	P29453	256 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	DEP1	P31385	405 aa		4.86	□□□□□ -1.63
HOM3	YER052C	MRS6	P32864	603 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	MAE1	P36013	669 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	PGM2	P37012	569 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	YHR020W	P38708	688 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	YAR028W	P39548	234 aa		4.86	□□□□□ -1.63
HOM3	YER052C	RSP5	P39940	809 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	SHE10	P53075	577 aa		4.86	□□□□□ -1.63
HOM3	YER052C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HOM3	YER052C	RAT1	Q02792	1006 aa	Known RBP	4.86	□□□□□ -1.63
HOM3	YER052C	PNG1	Q02890	363 aa		4.86	□□□□□ -1.63
HOM3	YER052C	YDR286C	Q05530	114 aa		4.86	□□□□□ -1.63
HOM3	YER052C	EAF1	Q06337	982 aa		4.86	□□□□□ -1.63
HOM3	YER052C	FMP25	Q08023	583 aa		4.86	□□□□□ -1.63
HOM3	YER052C	YLR125W	Q12138	136 aa		4.86	□□□□□ -1.63
HOM3	YER052C	GLE1	Q12315	538 aa		4.86	□□□□□ -1.63
HOM3	YER052C	PIF1	P07271	859 aa		4.85	□□□□□ -1.63
HOM3	YER052C	PHO8	P11491	566 aa		4.85	□□□□□ -1.63
HOM3	YER052C	PGI1	P12709	554 aa	Known RBP	4.85	□□□□□ -1.63
HOM3	YER052C	PET123	P17558	318 aa		4.85	□□□□□ -1.63
HOM3	YER052C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
HOM3	YER052C	GAR1	P28007	205 aa	Known RBP	4.85	□□□□□ -1.63
HOM3	YER052C	LTV1	P34078	463 aa		4.85	□□□□□ -1.63
HOM3	YER052C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
HOM3	YER052C	YAP3	P38749	330 aa		4.85	□□□□□ -1.63
HOM3	YER052C	HUL4	P40985	892 aa		4.85	□□□□□ -1.63
HOM3	YER052C	YGL176C	P46945	554 aa		4.85	□□□□□ -1.63
HOM3	YER052C	VPS53	P47061	822 aa		4.85	□□□□□ -1.63
HOM3	YER052C	YNR029C	P53729	429 aa	Known RBP	4.85	□□□□□ -1.63
HOM3	YER052C	UBX4	P54730	416 aa		4.85	□□□□□ -1.63
HOM3	YER052C	DBP9	Q06218	594 aa	Known RBP	4.85	□□□□□ -1.63
HOM3	YER052C	ESC2	Q06340	456 aa		4.85	□□□□□ -1.63
HOM3	YER052C	PTC5	Q12511	572 aa		4.85	□□□□□ -1.63
HOM3	YER052C	DNF3	Q12674	1656 aa		4.84	□□□□□ -1.63
HOM3	YER052C	CIT1	P00890	479 aa		4.84	□□□□□ -1.63
HOM3	YER052C	RED1	P14291	827 aa		4.84	□□□□□ -1.63
HOM3	YER052C	KAR3	P17119	729 aa		4.84	□□□□□ -1.63
HOM3	YER052C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
HOM3	YER052C	VMA8	P32610	256 aa	Known RBP	4.84	□□□□□ -1.63
HOM3	YER052C	TIM23	P32897	222 aa		4.84	□□□□□ -1.63
HOM3	YER052C	RGD1	P38339	666 aa		4.84	□□□□□ -1.63
HOM3	YER052C	RRF1	P38771	230 aa		4.84	□□□□□ -1.63
HOM3	YER052C	YER034W	P40022	185 aa	Known RBP	4.84	□□□□□ -1.63
HOM3	YER052C	NIT1	P40447	199 aa		4.84	□□□□□ -1.63
HOM3	YER052C	SPO74	P45819	413 aa		4.84	□□□□□ -1.63
HOM3	YER052C	DSE4	P53753	1117 aa		4.84	□□□□□ -1.63
HOM3	YER052C	REX2	P54964	269 aa	Known RBP	4.84	□□□□□ -1.63
HOM3	YER052C	ATG38	Q05789	226 aa	Known RBP	4.84	□□□□□ -1.63
HOM3	YER052C	RPN7	Q06103	429 aa	Known RBP	4.84	□□□□□ -1.63
HOM3	YER052C	AOS1	Q06624	347 aa		4.84	□□□□□ -1.63
HOM3	YER052C	PPM2	Q08282	695 aa		4.84	□□□□□ -1.63
HOM3	YER052C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
HOM3	YER052C	PGC1	Q08959	321 aa		4.84	□□□□□ -1.63
HOM3	YER052C	DPH6	Q12429	685 aa		4.84	□□□□□ -1.63
HOM3	YER052C	MCM3	P24279	971 aa	Known RBP	4.83	□□□□□ -1.64
HOM3	YER052C	SWC3	P31376	625 aa		4.83	□□□□□ -1.64
HOM3	YER052C	PTH2	P34222	208 aa		4.83	□□□□□ -1.64
HOM3	YER052C	NUP120	P35729	1037 aa		4.83	□□□□□ -1.64
HOM3	YER052C	CCL1	P37366	393 aa		4.83	□□□□□ -1.64
HOM3	YER052C	ALG3	P38179	458 aa		4.83	□□□□□ -1.64
HOM3	YER052C	RTT105	P40063	208 aa		4.83	□□□□□ -1.64
HOM3	YER052C	JJJ3	P47138	172 aa		4.83	□□□□□ -1.64
HOM3	YER052C	RAD17	P48581	401 aa		4.83	□□□□□ -1.64
HOM3	YER052C	UTP8	P53276	713 aa	Known RBP	4.83	□□□□□ -1.64
HOM3	YER052C	ALG6	Q12001	544 aa	Known RBP	4.83	□□□□□ -1.64
HOM3	YER052C	NFI1	Q12216	726 aa		4.83	□□□□□ -1.64
HOM3	YER052C	YVC1	Q12324	675 aa		4.83	□□□□□ -1.64
HOM3	YER052C	TMA17	Q12513	150 aa		4.83	□□□□□ -1.64
HOM3	YER052C	STF1	P01098	86 aa		4.82	□□□□□ -1.64
HOM3	YER052C	GLK1	P17709	500 aa	Known RBP	4.82	□□□□□ -1.64
HOM3	YER052C	RPC82	P32349	654 aa		4.82	□□□□□ -1.64
HOM3	YER052C	AFG2	P32794	780 aa		4.82	□□□□□ -1.64
HOM3	YER052C	NOP4	P37838	685 aa	Known RBP	4.82	□□□□□ -1.64
HOM3	YER052C	ARB1	P40024	610 aa	Known RBP	4.82	□□□□□ -1.64
HOM3	YER052C	ALR2	P43553	858 aa		4.82	□□□□□ -1.64
HOM3	YER052C	YGR045C	P53229	120 aa		4.82	□□□□□ -1.64
HOM3	YER052C	SNZ1	Q03148	297 aa		4.82	□□□□□ -1.64
HOM3	YER052C	BUL2	Q03758	920 aa	Known RBP	4.82	□□□□□ -1.64
HOM3	YER052C	SMD2	Q06217	110 aa	Known RBP	4.82	□□□□□ -1.64
HOM3	YER052C	YOR389W	Q08912	624 aa		4.82	□□□□□ -1.64
HOM3	YER052C	BMS1	Q08965	1183 aa	Known RBP	4.82	□□□□□ -1.64
HOM3	YER052C	YOR223W	Q12015	292 aa		4.82	□□□□□ -1.64
HOM3	YER052C	YOL087C	Q99247	1116 aa		4.82	□□□□□ -1.64
HOM3	YER052C	CAT8	P39113	1433 aa		4.82	□□□□□ -1.64
HOM3	YER052C	ADR1	P07248	1323 aa		4.82	□□□□□ -1.64
HOM3	YER052C	CAN1	P04817	590 aa		4.82	□□□□□ -1.64
HOM3	YER052C	HMG1	P12683	1054 aa		4.82	□□□□□ -1.64
HOM3	YER052C	ERS1	P17261	260 aa		4.82	□□□□□ -1.64
HOM3	YER052C	NFS1	P25374	497 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms