RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C POL31P46957 487 aa4.75□□□□□ -1.65
PRP28YDR243C UBP15P50101 1230 aa4.75□□□□□ -1.65
PRP28YDR243C MAL13P53338 473 aa4.75□□□□□ -1.65
PRP28YDR243C COG6P53959 839 aa4.75□□□□□ -1.65
PRP28YDR243C TMA64Q04600 565 aaKnown RBP4.75□□□□□ -1.65
PRP28YDR243C DYN3Q04949 312 aa4.75□□□□□ -1.65
PRP28YDR243C YPQ2Q06328 317 aa4.75□□□□□ -1.65
PRP28YDR243C MAG2Q06436 670 aaKnown RBP4.75□□□□□ -1.65
PRP28YDR243C MED4Q12343 284 aa4.75□□□□□ -1.65
PRP28YDR243C DBP10Q12389 995 aaKnown RBP4.75□□□□□ -1.65
PRP28YDR243C OCA6Q12454 224 aa4.75□□□□□ -1.65
PRP28YDR243C PMS1P14242 873 aa4.74□□□□□ -1.65
PRP28YDR243C BUD23P25627 275 aaPredicted RBP4.74□□□□□ -1.65
PRP28YDR243C TPS2P31688 896 aaKnown RBP4.74□□□□□ -1.65
PRP28YDR243C PEP7P32609 515 aa4.74□□□□□ -1.65
PRP28YDR243C DUR3P33413 735 aa4.74□□□□□ -1.65
PRP28YDR243C UTP11P34247 250 aaPredicted RBP4.74□□□□□ -1.65
PRP28YDR243C OCA5P38738 679 aa4.74□□□□□ -1.65
PRP28YDR243C CCT5P40413 562 aaKnown RBP4.74□□□□□ -1.65
PRP28YDR243C YJR098CP47139 656 aa4.74□□□□□ -1.65
PRP28YDR243C GCV2P49095 1034 aa4.74□□□□□ -1.65
PRP28YDR243C RNR4P49723 345 aaKnown RBP4.74□□□□□ -1.65
PRP28YDR243C MDR1P53258 950 aa4.74□□□□□ -1.65
PRP28YDR243C SWP1Q02795 286 aa4.74□□□□□ -1.65
PRP28YDR243C FIN1Q03898 291 aa4.74□□□□□ -1.65
PRP28YDR243C YMR018WQ04364 514 aa4.74□□□□□ -1.65
PRP28YDR243C BRX1Q08235 291 aaKnown RBP4.74□□□□□ -1.65
PRP28YDR243C SOG2Q08817 791 aa4.74□□□□□ -1.65
PRP28YDR243C CTI6Q08923 506 aa4.74□□□□□ -1.65
PRP28YDR243C RRP6Q12149 733 aaKnown RBP4.74□□□□□ -1.65
PRP28YDR243C BBP1Q12365 385 aa4.74□□□□□ -1.65
PRP28YDR243C VPS15P22219 1454 aa4.74□□□□□ -1.65
PRP28YDR243C VMA4P22203 233 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C YCR016WP25617 290 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C PXA2P34230 853 aa4.73□□□□□ -1.65
PRP28YDR243C ATP3P38077 311 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C TAF5P38129 798 aa4.73□□□□□ -1.65
PRP28YDR243C REV7P38927 245 aa4.73□□□□□ -1.65
PRP28YDR243C HXT6P39003 570 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C HXT7P39004 570 aa4.73□□□□□ -1.65
PRP28YDR243C RIC1P40395 1056 aa4.73□□□□□ -1.65
PRP28YDR243C VTC2P43585 828 aa4.73□□□□□ -1.65
PRP28YDR243C PCL10P53124 433 aa4.73□□□□□ -1.65
PRP28YDR243C LSC2P53312 427 aa4.73□□□□□ -1.65
PRP28YDR243C FYV6P53913 173 aa4.73□□□□□ -1.65
PRP28YDR243C UBP2Q01476 1272 aa4.73□□□□□ -1.65
PRP28YDR243C ADA2Q02336 434 aa4.73□□□□□ -1.65
PRP28YDR243C SGD1Q06132 899 aa4.73□□□□□ -1.65
PRP28YDR243C HDA3Q06623 655 aa4.73□□□□□ -1.65
PRP28YDR243C ATG13Q06628 738 aa4.73□□□□□ -1.65
PRP28YDR243C UBX5Q06682 500 aa4.73□□□□□ -1.65
PRP28YDR243C RSA1Q08932 381 aa4.73□□□□□ -1.65
PRP28YDR243C FAP7Q12055 197 aaPredicted RBP4.73□□□□□ -1.65
PRP28YDR243C DNF2Q12675 1612 aa4.73□□□□□ -1.65
PRP28YDR243C UBC1P21734 215 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C PHO3P24031 467 aa4.73□□□□□ -1.65
PRP28YDR243C ITR1P30605 584 aa4.73□□□□□ -1.65
PRP28YDR243C UTR2P32623 467 aa4.73□□□□□ -1.65
PRP28YDR243C XRS2P33301 854 aa4.73□□□□□ -1.65
PRP28YDR243C LOS1P33418 1100 aaPredicted RBP4.73□□□□□ -1.65
PRP28YDR243C PGM2P37012 569 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C PCH2P38126 564 aa4.73□□□□□ -1.65
PRP28YDR243C MRX3P38172 270 aa4.73□□□□□ -1.65
PRP28YDR243C RTT105P40063 208 aa4.73□□□□□ -1.65
PRP28YDR243C GPD2P41911 440 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C SNZ3P43545 298 aa4.73□□□□□ -1.65
PRP28YDR243C YGL176CP46945 554 aa4.73□□□□□ -1.65
PRP28YDR243C PEX14P53112 341 aa4.73□□□□□ -1.65
PRP28YDR243C SNZ2P53824 298 aa4.73□□□□□ -1.65
PRP28YDR243C ATG38Q05789 226 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C DBP9Q06218 594 aaKnown RBP4.73□□□□□ -1.65
PRP28YDR243C WTM2Q12206 467 aa4.73□□□□□ -1.65
PRP28YDR243C YBL113CQ7M4S9 792 aa4.73□□□□□ -1.65
PRP28YDR243C HAP1P0CE41 1502 aa4.73□□□□□ -1.65
PRP28YDR243C DNF1P32660 1571 aa4.72□□□□□ -1.65
PRP28YDR243C RNR2P09938 399 aaKnown RBP4.72□□□□□ -1.65
PRP28YDR243C SSB1P11484 613 aaKnown RBP4.72□□□□□ -1.65
PRP28YDR243C TPM1P17536 199 aaKnown RBP4.72□□□□□ -1.65
PRP28YDR243C VAN1P23642 535 aa4.72□□□□□ -1.65
PRP28YDR243C FES1P38260 290 aa4.72□□□□□ -1.65
PRP28YDR243C PEX18P38855 283 aa4.72□□□□□ -1.65
PRP28YDR243C SMC2P38989 1170 aaKnown RBP4.72□□□□□ -1.65
PRP28YDR243C PIK1P39104 1066 aa4.72□□□□□ -1.65
PRP28YDR243C MBP1P39678 833 aa4.72□□□□□ -1.65
PRP28YDR243C MET10P39692 1035 aa4.72□□□□□ -1.65
PRP28YDR243C SSB2P40150 613 aaKnown RBP4.72□□□□□ -1.65
PRP28YDR243C MNT3P40549 630 aa4.72□□□□□ -1.65
PRP28YDR243C SAP155P43612 1002 aa4.72□□□□□ -1.65
PRP28YDR243C TAF12Q03761 539 aa4.72□□□□□ -1.65
PRP28YDR243C TRS120Q04183 1289 aa4.72□□□□□ -1.65
PRP28YDR243C EMI2Q04409 500 aaKnown RBP4.72□□□□□ -1.65
PRP28YDR243C GIC2Q06648 383 aa4.72□□□□□ -1.65
PRP28YDR243C ATG23Q06671 453 aa4.72□□□□□ -1.65
PRP28YDR243C TMA16Q08687 178 aa4.72□□□□□ -1.65
PRP28YDR243C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
PRP28YDR243C JIP3O13555 125 aa4.71□□□□□ -1.66
PRP28YDR243C RPP2BP02400 110 aaKnown RBP4.71□□□□□ -1.66
PRP28YDR243C SBP1P10080 294 aaKnown RBP4.71□□□□□ -1.66
PRP28YDR243C DAT1P13483 248 aaKnown RBP4.71□□□□□ -1.66
PRP28YDR243C FRS2P15625 503 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms