RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	DIP5	P53388	608 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	SML1	Q04964	104 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	ARP6	Q12509	438 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	Q0182	Q9ZZW1	134 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
SUP35	YDR172W	SEC23	P15303	768 aa	Known RBP	5.13	□□□□□ -1.59
SUP35	YDR172W	RAD57	P25301	460 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	SRO9	P25567	434 aa	Known RBP	5.13	□□□□□ -1.59
SUP35	YDR172W	TRK2	P28584	889 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	YBR197C	P38306	217 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	SIP3	P38717	1229 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	TCD1	P38756	429 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	PEA2	P40091	420 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	EFM4	P40516	257 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	HUL4	P40985	892 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	TAD1	P53065	400 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	SOL4	P53315	255 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	PNP1	Q05788	311 aa		5.13	□□□□□ -1.59
SUP35	YDR172W	TOM70	P07213	617 aa	Known RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	PFK1	P16861	987 aa	Known RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	STE11	P23561	717 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	ISW1	P38144	1129 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	PHO88	P38264	188 aa	Predicted RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	NDC80	P40460	691 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	CTR1	P49573	406 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	NBP1	P52919	319 aa	Predicted RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	MFM1	Q02783	413 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	YML037C	Q03703	340 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	RBA50	Q04418	439 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	VAC14	Q06708	880 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	GIN4	Q12263	1142 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	RPC53	P25441	422 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	UGA4	P32837	571 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	XRS2	P33301	854 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	SCD5	P34758	872 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	UBP11	P36026	717 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	MCX1	P38323	520 aa	Predicted RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	SMF1	P38925	575 aa		5.12	□□□□□ -1.59
SUP35	YDR172W	WHI4	Q07655	649 aa	Known RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	NEW1	Q08972	1196 aa	Known RBP	5.12	□□□□□ -1.59
SUP35	YDR172W	LEU1	P07264	779 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	PAP1	P29468	568 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	YEL1	P34225	687 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	CCM1	P48237	864 aa	Predicted RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	YGL039W	P53183	348 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	OYE2	Q03558	400 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	UTP5	Q04177	643 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	TMA64	Q04600	565 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	SOV1	Q04748	898 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	FUS2	Q05670	677 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	TCO89	Q08921	799 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	YKL068W-A	Q3E826	78 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	FBP1	P09201	348 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	SAM1	P10659	382 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	RAD18	P10862	487 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	SSB1	P11484	613 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
SUP35	YDR172W	CDC60	P26637	1090 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	DPB3	P27344	201 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	SMC1	P32908	1225 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	OCT1	P35999	772 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	PGM2	P37012	569 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	SET5	P38890	526 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	SSB2	P40150	613 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	NUP82	P40368	713 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	NGL3	Q03210	505 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	SIL1	Q08199	421 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	RKM4	Q12504	494 aa		5.11	□□□□□ -1.59
SUP35	YDR172W	NOP14	Q99207	810 aa	Known RBP	5.11	□□□□□ -1.59
SUP35	YDR172W	CIN4	P39110	191 aa		5.1	□□□□□ -1.59
SUP35	YDR172W	YMR124W	P39523	943 aa	Known RBP	5.1	□□□□□ -1.59
SUP35	YDR172W	BOL3	P39724	118 aa		5.1	□□□□□ -1.59
SUP35	YDR172W	MMM1	P41800	426 aa		5.1	□□□□□ -1.59
SUP35	YDR172W	TOF1	P53840	1238 aa		5.1	□□□□□ -1.59
SUP35	YDR172W	FAL1	Q12099	399 aa	Known RBP	5.1	□□□□□ -1.59
SUP35	YDR172W	CLN3	P13365	580 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	ISC10	P32645	267 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	YKL023W	P36103	277 aa	Known RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	CCT4	P39078	528 aa	Known RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	GPD2	P41911	440 aa	Known RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	RRT6	P53117	311 aa	Predicted RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	LIF1	P53150	421 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	CUZ1	P53899	274 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	ARK1	P53974	638 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	YPL277C	Q08989	487 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	PLP2	Q12017	286 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	MRPL33	P20084	86 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	APL1	P27351	700 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	CDC3	P32457	520 aa	Known RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	SRB4	P32569	687 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	PGM1	P33401	570 aa	Known RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	NIP100	P33420	868 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	TGL1	P34163	548 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	SHP1	P34223	423 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	PNT1	P38969	423 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	SAP1	P39955	897 aa	Known RBP	5.09	□□□□□ -1.59
SUP35	YDR172W	BUD16	P39988	312 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	VAB2	P40003	282 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	YTA6	P40328	754 aa		5.09	□□□□□ -1.59
SUP35	YDR172W	ALD6	P54115	500 aa	Known RBP	5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms