RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C RPS7AP26786 190 aaKnown RBP6.69□□□□□ -1.34
VPS61YDR136C PDB1P32473 366 aaKnown RBP6.69□□□□□ -1.34
VPS61YDR136C SWE1P32944 819 aa6.69□□□□□ -1.34
VPS61YDR136C SUL1P38359 859 aa6.69□□□□□ -1.34
VPS61YDR136C MMS21P38632 267 aa6.69□□□□□ -1.34
VPS61YDR136C GSM1P42950 618 aa6.69□□□□□ -1.34
VPS61YDR136C COS5P47187 383 aa6.69□□□□□ -1.34
VPS61YDR136C VID30P53076 958 aa6.69□□□□□ -1.34
VPS61YDR136C RIM8P53179 542 aa6.69□□□□□ -1.34
VPS61YDR136C LSB1P53281 241 aa6.69□□□□□ -1.34
VPS61YDR136C ESBP6P53918 673 aa6.69□□□□□ -1.34
VPS61YDR136C YMR187CQ03236 431 aa6.69□□□□□ -1.34
VPS61YDR136C GIR2Q03768 265 aaPredicted RBP6.69□□□□□ -1.34
VPS61YDR136C TDA9Q04545 1251 aa6.69□□□□□ -1.34
VPS61YDR136C YLR297WQ05899 129 aa6.69□□□□□ -1.34
VPS61YDR136C CSR1Q06705 408 aaKnown RBP6.69□□□□□ -1.34
VPS61YDR136C YPL277CQ08989 487 aa6.69□□□□□ -1.34
VPS61YDR136C TAF10Q12030 206 aa6.69□□□□□ -1.34
VPS61YDR136C SPO21Q12411 609 aa6.69□□□□□ -1.34
VPS61YDR136C GRX6Q12438 231 aa6.69□□□□□ -1.34
VPS61YDR136C SEC39Q12745 709 aa6.69□□□□□ -1.34
VPS61YDR136C YEL077CQ3E7X8 1277 aa6.69□□□□□ -1.34
VPS61YDR136C PCK1P10963 549 aa6.68□□□□□ -1.34
VPS61YDR136C SAM2P19358 384 aaKnown RBP6.68□□□□□ -1.34
VPS61YDR136C NAM7P30771 971 aaKnown RBP6.68□□□□□ -1.34
VPS61YDR136C YME1P32795 747 aa6.68□□□□□ -1.34
VPS61YDR136C CST26P38226 397 aa6.68□□□□□ -1.34
VPS61YDR136C SAK1P38990 1142 aa6.68□□□□□ -1.34
VPS61YDR136C RIO2P40160 425 aaKnown RBP6.68□□□□□ -1.34
VPS61YDR136C BRE2P43132 505 aa6.68□□□□□ -1.34
VPS61YDR136C NMD5P46970 1048 aa6.68□□□□□ -1.34
VPS61YDR136C URB2P47108 1174 aa6.68□□□□□ -1.34
VPS61YDR136C ZPR1P53303 486 aaKnown RBP6.68□□□□□ -1.34
VPS61YDR136C RPL22BP56628 122 aaKnown RBP6.68□□□□□ -1.34
VPS61YDR136C USA1Q03714 838 aa6.68□□□□□ -1.34
VPS61YDR136C UTP14Q04500 899 aaKnown RBP6.68□□□□□ -1.34
VPS61YDR136C YPR097WQ06839 1073 aa6.68□□□□□ -1.34
VPS61YDR136C GAS5Q08193 484 aa6.68□□□□□ -1.34
VPS61YDR136C AIM41Q12032 185 aa6.68□□□□□ -1.34
VPS61YDR136C ARG1P22768 420 aa6.67□□□□□ -1.34
VPS61YDR136C SPT5P27692 1063 aaKnown RBP6.67□□□□□ -1.34
VPS61YDR136C SEC21P32074 935 aaKnown RBP6.67□□□□□ -1.34
VPS61YDR136C PLC1P32383 869 aa6.67□□□□□ -1.34
VPS61YDR136C HEL1P36113 551 aa6.67□□□□□ -1.34
VPS61YDR136C YKR018CP36114 725 aa6.67□□□□□ -1.34
VPS61YDR136C SIC1P38634 284 aa6.67□□□□□ -1.34
VPS61YDR136C LCP5P40079 357 aaPredicted RBP6.67□□□□□ -1.34
VPS61YDR136C SMX2P40204 77 aaKnown RBP6.67□□□□□ -1.34
VPS61YDR136C TMA22P47089 198 aaPredicted RBP6.67□□□□□ -1.34
VPS61YDR136C CUR1Q06469 252 aa6.67□□□□□ -1.34
VPS61YDR136C YDL124WQ07551 312 aaKnown RBP6.67□□□□□ -1.34
VPS61YDR136C FRA1Q07825 749 aa6.67□□□□□ -1.34
VPS61YDR136C NCA2Q12374 616 aa6.67□□□□□ -1.34
VPS61YDR136C SEY1Q99287 776 aa6.67□□□□□ -1.34
VPS61YDR136C JIP3O13555 125 aa6.66□□□□□ -1.34
VPS61YDR136C YLR462WO13556 202 aa6.66□□□□□ -1.34
VPS61YDR136C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
VPS61YDR136C PWP2P25635 923 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C EUG1P32474 517 aa6.66□□□□□ -1.34
VPS61YDR136C NIP1P32497 812 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C RAD5P32849 1169 aaPredicted RBP6.66□□□□□ -1.34
VPS61YDR136C YEL1P34225 687 aa6.66□□□□□ -1.34
VPS61YDR136C YKL050CP35736 922 aa6.66□□□□□ -1.34
VPS61YDR136C ERT1P38140 529 aa6.66□□□□□ -1.34
VPS61YDR136C ECM2P38241 364 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C HIS2P38635 335 aa6.66□□□□□ -1.34
VPS61YDR136C YHL049CP38722 271 aa6.66□□□□□ -1.34
VPS61YDR136C SPC72P39723 622 aa6.66□□□□□ -1.34
VPS61YDR136C YEL075CP39972 122 aa6.66□□□□□ -1.34
VPS61YDR136C YER189WP40104 122 aa6.66□□□□□ -1.34
VPS61YDR136C PSY2P40164 858 aa6.66□□□□□ -1.34
VPS61YDR136C YFL064CP43540 174 aa6.66□□□□□ -1.34
VPS61YDR136C ILM1P47155 203 aa6.66□□□□□ -1.34
VPS61YDR136C BRO1P48582 844 aa6.66□□□□□ -1.34
VPS61YDR136C JJJ1P53863 590 aa6.66□□□□□ -1.34
VPS61YDR136C UTP6Q02354 440 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C MTG1Q03151 367 aaPredicted RBP6.66□□□□□ -1.34
VPS61YDR136C VPS16Q03308 798 aa6.66□□□□□ -1.34
VPS61YDR136C VPS72Q03388 795 aa6.66□□□□□ -1.34
VPS61YDR136C TAF9Q05027 157 aa6.66□□□□□ -1.34
VPS61YDR136C PNP1Q05788 311 aa6.66□□□□□ -1.34
VPS61YDR136C MAG2Q06436 670 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C RLP24Q07915 199 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C NOB1Q08444 459 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C OXR1Q08952 273 aa6.66□□□□□ -1.34
VPS61YDR136C PUS1Q12211 544 aaKnown RBP6.66□□□□□ -1.34
VPS61YDR136C YBL111CQ3E7Y5 667 aa6.66□□□□□ -1.34
VPS61YDR136C SNF1P06782 633 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C SRD1P09007 221 aa6.65□□□□□ -1.34
VPS61YDR136C PHO8P11491 566 aa6.65□□□□□ -1.34
VPS61YDR136C PEP5P12868 1029 aa6.65□□□□□ -1.34
VPS61YDR136C KRS1P15180 591 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C PRP22P24384 1145 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C SWI3P32591 825 aa6.65□□□□□ -1.34
VPS61YDR136C YKU70P32807 602 aa6.65□□□□□ -1.34
VPS61YDR136C YKL023WP36103 277 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C TRZ1P36159 838 aaPredicted RBP6.65□□□□□ -1.34
VPS61YDR136C HEK2P38199 381 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
VPS61YDR136C TIF5P38431 405 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C NDT80P38830 627 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms