RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W UBC11P52492 156 aa2.84□□□□□ -1.95
CDC36YDL165W OYE2Q03558 400 aaKnown RBP2.84□□□□□ -1.95
CDC36YDL165W BUL2Q03758 920 aaKnown RBP2.84□□□□□ -1.95
CDC36YDL165W MUS81Q04149 632 aaPredicted RBP2.84□□□□□ -1.95
CDC36YDL165W RGT2Q12300 763 aa2.84□□□□□ -1.95
CDC36YDL165W YLR415CO13578 112 aa2.83□□□□□ -1.96
CDC36YDL165W CLN2P20438 545 aa2.83□□□□□ -1.96
CDC36YDL165W VPS34P22543 875 aa2.83□□□□□ -1.96
CDC36YDL165W NGG1P32494 702 aa2.83□□□□□ -1.96
CDC36YDL165W SIT1P39980 628 aa2.83□□□□□ -1.96
CDC36YDL165W NDC80P40460 691 aa2.83□□□□□ -1.96
CDC36YDL165W CCM1P48237 864 aaPredicted RBP2.83□□□□□ -1.96
CDC36YDL165W GDE1Q02979 1223 aa2.83□□□□□ -1.96
CDC36YDL165W OSW1Q08692 278 aa2.83□□□□□ -1.96
CDC36YDL165W TGL5Q12043 749 aa2.83□□□□□ -1.96
CDC36YDL165W FAL1Q12099 399 aaKnown RBP2.83□□□□□ -1.96
CDC36YDL165W RPS9AO13516 197 aaKnown RBP2.82□□□□□ -1.96
CDC36YDL165W PTP1P25044 335 aa2.82□□□□□ -1.96
CDC36YDL165W HIR1P32479 840 aa2.82□□□□□ -1.96
CDC36YDL165W UBS1P38290 277 aa2.82□□□□□ -1.96
CDC36YDL165W PZF1P39933 429 aa2.82□□□□□ -1.96
CDC36YDL165W PAC2P39937 518 aa2.82□□□□□ -1.96
CDC36YDL165W STB2P46679 850 aa2.82□□□□□ -1.96
CDC36YDL165W DUS1P53759 423 aaKnown RBP2.82□□□□□ -1.96
CDC36YDL165W SAK1P38990 1142 aa2.81□□□□□ -1.96
CDC36YDL165W TOK1P40310 691 aa2.81□□□□□ -1.96
CDC36YDL165W YAP1802P53309 568 aa2.81□□□□□ -1.96
CDC36YDL165W SHE9Q04172 456 aa2.81□□□□□ -1.96
CDC36YDL165W TDA9Q04545 1251 aa2.81□□□□□ -1.96
CDC36YDL165W HAL9Q12180 1030 aa2.81□□□□□ -1.96
CDC36YDL165W LTP1P40347 161 aa2.8□□□□□ -1.96
CDC36YDL165W PFA3P42836 336 aa2.8□□□□□ -1.96
CDC36YDL165W NET1P47035 1189 aa2.8□□□□□ -1.96
CDC36YDL165W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
CDC36YDL165W MPS1P54199 764 aa2.8□□□□□ -1.96
CDC36YDL165W SIR3P06701 978 aa2.79□□□□□ -1.96
CDC36YDL165W GLG1P36143 616 aa2.79□□□□□ -1.96
CDC36YDL165W BDH2P39713 417 aa2.79□□□□□ -1.96
CDC36YDL165W BAP3P41815 604 aa2.79□□□□□ -1.96
CDC36YDL165W SSY5P47002 699 aa2.79□□□□□ -1.96
CDC36YDL165W LCD1Q04377 747 aa2.79□□□□□ -1.96
CDC36YDL165W CIR2Q08822 631 aa2.79□□□□□ -1.96
CDC36YDL165W ATG11Q12527 1178 aa2.79□□□□□ -1.96
CDC36YDL165W CYS3P31373 394 aaKnown RBP2.78□□□□□ -1.96
CDC36YDL165W REC104P33323 182 aa2.78□□□□□ -1.96
CDC36YDL165W SIC1P38634 284 aa2.78□□□□□ -1.96
CDC36YDL165W ARG2P40360 574 aa2.78□□□□□ -1.96
CDC36YDL165W CTR1P49573 406 aa2.78□□□□□ -1.96
CDC36YDL165W ERG11P10614 530 aa2.77□□□□□ -1.97
CDC36YDL165W YKL069WP36088 180 aa2.77□□□□□ -1.97
CDC36YDL165W REV7P38927 245 aa2.77□□□□□ -1.97
CDC36YDL165W XBP1P40489 647 aa2.77□□□□□ -1.97
CDC36YDL165W UBC9P50623 157 aaPredicted RBP2.77□□□□□ -1.97
CDC36YDL165W MRK1P50873 501 aa2.77□□□□□ -1.97
CDC36YDL165W TPO2P53283 614 aa2.77□□□□□ -1.97
CDC36YDL165W YOR022CQ12204 715 aa2.77□□□□□ -1.97
CDC36YDL165W YLR149CQ99296 730 aa2.77□□□□□ -1.97
CDC36YDL165W PYC1P11154 1178 aaKnown RBP2.76□□□□□ -1.97
CDC36YDL165W HBS1P32769 611 aaKnown RBP2.76□□□□□ -1.97
CDC36YDL165W HRB1P38922 454 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
CDC36YDL165W GPR1Q12361 961 aa2.76□□□□□ -1.97
CDC36YDL165W YKL033W-AQ86ZR7 236 aa2.76□□□□□ -1.97
CDC36YDL165W PGK1P00560 416 aaKnown RBP2.75□□□□□ -1.97
CDC36YDL165W PHR1P05066 565 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
CDC36YDL165W HEM3P28789 327 aa2.75□□□□□ -1.97
CDC36YDL165W PBY1P38254 753 aa2.75□□□□□ -1.97
CDC36YDL165W MEP2P41948 499 aa2.75□□□□□ -1.97
CDC36YDL165W TEX1P53851 422 aaKnown RBP2.75□□□□□ -1.97
CDC36YDL165W OPI10Q08202 246 aa2.75□□□□□ -1.97
CDC36YDL165W ENV7Q12003 364 aa2.75□□□□□ -1.97
CDC36YDL165W MRP8P35719 219 aa2.74□□□□□ -1.97
CDC36YDL165W CCT3P39077 534 aaKnown RBP2.74□□□□□ -1.97
CDC36YDL165W PAN2P53010 1115 aaPredicted RBP2.74□□□□□ -1.97
CDC36YDL165W NOG2P53742 486 aaKnown RBP2.74□□□□□ -1.97
CDC36YDL165W RSC3Q06639 885 aa2.74□□□□□ -1.97
CDC36YDL165W SLK19Q08581 821 aaKnown RBP2.74□□□□□ -1.97
CDC36YDL165W PRI2P20457 528 aa2.73□□□□□ -1.97
CDC36YDL165W NUP1P20676 1076 aa2.73□□□□□ -1.97
CDC36YDL165W ASF1P32447 279 aa2.73□□□□□ -1.97
CDC36YDL165W SPC29P33419 253 aa2.73□□□□□ -1.97
CDC36YDL165W YBR259WP38338 688 aa2.73□□□□□ -1.97
CDC36YDL165W MUP3P38734 546 aa2.73□□□□□ -1.97
CDC36YDL165W SFB3P38810 929 aa2.73□□□□□ -1.97
CDC36YDL165W ATG4P53867 494 aa2.73□□□□□ -1.97
CDC36YDL165W GAD1Q04792 585 aa2.73□□□□□ -1.97
CDC36YDL165W GEP3Q08622 556 aa2.73□□□□□ -1.97
CDC36YDL165W YPR071WQ12346 211 aa2.73□□□□□ -1.97
CDC36YDL165W PRC1P00729 532 aa2.72□□□□□ -1.97
CDC36YDL165W STE4P18851 423 aa2.72□□□□□ -1.97
CDC36YDL165W DAL7P21826 554 aa2.72□□□□□ -1.97
CDC36YDL165W RSP5P39940 809 aaKnown RBP2.72□□□□□ -1.97
CDC36YDL165W FHN1P53279 174 aa2.72□□□□□ -1.97
CDC36YDL165W CWC24P53769 259 aa2.72□□□□□ -1.97
CDC36YDL165W TOP3P13099 656 aa2.71□□□□□ -1.98
CDC36YDL165W YCL002CP25565 263 aa2.71□□□□□ -1.98
CDC36YDL165W CCR4P31384 837 aaKnown RBP2.71□□□□□ -1.98
CDC36YDL165W FMO1P38866 432 aa2.71□□□□□ -1.98
CDC36YDL165W IRR1P40541 1150 aa2.71□□□□□ -1.98
CDC36YDL165W MTL1P53214 551 aa2.71□□□□□ -1.98
CDC36YDL165W LRS4Q04087 347 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms