RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W SPT7P35177 1332 aa5.34□□□□□ -1.55
KIN28YDL108W RPS9AO13516 197 aaKnown RBP5.34□□□□□ -1.55
KIN28YDL108W QCR6P00127 147 aa5.34□□□□□ -1.55
KIN28YDL108W URA1P28272 314 aaPredicted RBP5.34□□□□□ -1.55
KIN28YDL108W SFP1P32432 683 aa5.34□□□□□ -1.55
KIN28YDL108W MTC2P34246 357 aa5.34□□□□□ -1.55
KIN28YDL108W CRP1P38845 465 aaKnown RBP5.34□□□□□ -1.55
KIN28YDL108W MEP1P40260 492 aa5.34□□□□□ -1.55
KIN28YDL108W ECL1P48235 211 aa5.34□□□□□ -1.55
KIN28YDL108W RAI1P53063 387 aaKnown RBP5.34□□□□□ -1.55
KIN28YDL108W YDR514CQ04408 483 aa5.34□□□□□ -1.55
KIN28YDL108W SGD1Q06132 899 aa5.34□□□□□ -1.55
KIN28YDL108W SGT2Q12118 346 aaKnown RBP5.34□□□□□ -1.55
KIN28YDL108W MDM12Q92328 271 aa5.34□□□□□ -1.55
KIN28YDL108W NOP14Q99207 810 aaKnown RBP5.34□□□□□ -1.55
KIN28YDL108W SRM1P21827 482 aa5.33□□□□□ -1.56
KIN28YDL108W MEF1P25039 761 aa5.33□□□□□ -1.56
KIN28YDL108W LRG1P35688 1017 aa5.33□□□□□ -1.56
KIN28YDL108W PES4P39684 611 aa5.33□□□□□ -1.56
KIN28YDL108W DOT6P40059 670 aaKnown RBP5.33□□□□□ -1.56
KIN28YDL108W DJP1P40564 432 aa5.33□□□□□ -1.56
KIN28YDL108W MND2P40577 368 aa5.33□□□□□ -1.56
KIN28YDL108W CEP3P40969 608 aa5.33□□□□□ -1.56
KIN28YDL108W YGR021WP53212 290 aa5.33□□□□□ -1.56
KIN28YDL108W GTF1P53260 183 aaPredicted RBP5.33□□□□□ -1.56
KIN28YDL108W MRPL22P53881 309 aa5.33□□□□□ -1.56
KIN28YDL108W PRP3Q03338 469 aaPredicted RBP5.33□□□□□ -1.56
KIN28YDL108W ROT1Q03691 256 aa5.33□□□□□ -1.56
KIN28YDL108W CDA1Q06702 301 aa5.33□□□□□ -1.56
KIN28YDL108W REH1Q06709 432 aa5.33□□□□□ -1.56
KIN28YDL108W MET7Q08645 548 aa5.33□□□□□ -1.56
KIN28YDL108W VPS5Q92331 675 aa5.33□□□□□ -1.56
KIN28YDL108W VBA3P25594 458 aa5.32□□□□□ -1.56
KIN28YDL108W STE13P33894 931 aa5.32□□□□□ -1.56
KIN28YDL108W BFA1P47113 574 aa5.32□□□□□ -1.56
KIN28YDL108W PBP1P53297 722 aaKnown RBP5.32□□□□□ -1.56
KIN28YDL108W RCF1Q03713 159 aa5.32□□□□□ -1.56
KIN28YDL108W SLX4Q12098 748 aa5.32□□□□□ -1.56
KIN28YDL108W CLF1Q12309 687 aaPredicted RBP5.32□□□□□ -1.56
KIN28YDL108W SPE1P08432 466 aa5.31□□□□□ -1.56
KIN28YDL108W RNA1P11745 407 aaKnown RBP5.31□□□□□ -1.56
KIN28YDL108W DAL7P21826 554 aa5.31□□□□□ -1.56
KIN28YDL108W MRC1P25588 1096 aa5.31□□□□□ -1.56
KIN28YDL108W POA1P38218 177 aa5.31□□□□□ -1.56
KIN28YDL108W PUS2P53167 370 aa5.31□□□□□ -1.56
KIN28YDL108W NOG2P53742 486 aaKnown RBP5.31□□□□□ -1.56
KIN28YDL108W TFB2Q02939 513 aa5.31□□□□□ -1.56
KIN28YDL108W ATP25Q03153 612 aa5.31□□□□□ -1.56
KIN28YDL108W GRX3Q03835 250 aa5.31□□□□□ -1.56
KIN28YDL108W RSC3Q06639 885 aa5.31□□□□□ -1.56
KIN28YDL108W RPP2AP05319 106 aaKnown RBP5.3□□□□□ -1.56
KIN28YDL108W YEF3P16521 1044 aaKnown RBP5.3□□□□□ -1.56
KIN28YDL108W RAD51P25454 400 aa5.3□□□□□ -1.56
KIN28YDL108W PER1P25625 357 aa5.3□□□□□ -1.56
KIN28YDL108W TYE7P33122 291 aaPredicted RBP5.3□□□□□ -1.56
KIN28YDL108W SAP190P36123 1033 aa5.3□□□□□ -1.56
KIN28YDL108W LAM1P38851 1228 aa5.3□□□□□ -1.56
KIN28YDL108W TAD1P53065 400 aa5.3□□□□□ -1.56
KIN28YDL108W PEX8P53248 589 aa5.3□□□□□ -1.56
KIN28YDL108W VTI1Q04338 217 aa5.3□□□□□ -1.56
KIN28YDL108W YOR378WQ08902 515 aa5.3□□□□□ -1.56
KIN28YDL108W NOP58Q12499 511 aaKnown RBP5.3□□□□□ -1.56
KIN28YDL108W ADR1P07248 1323 aa5.29□□□□□ -1.56
KIN28YDL108W CDC9P04819 755 aa5.29□□□□□ -1.56
KIN28YDL108W GAS1P22146 559 aaKnown RBP5.29□□□□□ -1.56
KIN28YDL108W GFD2P25370 566 aaKnown RBP5.29□□□□□ -1.56
KIN28YDL108W SEG2P34250 1132 aa5.29□□□□□ -1.56
KIN28YDL108W ATG19P35193 415 aa5.29□□□□□ -1.56
KIN28YDL108W YKR011CQ02209 353 aa5.29□□□□□ -1.56
KIN28YDL108W PLB2Q03674 706 aa5.29□□□□□ -1.56
KIN28YDL108W YPR172WQ06608 200 aa5.29□□□□□ -1.56
KIN28YDL108W TPO1Q07824 586 aa5.29□□□□□ -1.56
KIN28YDL108W CEX1Q12453 761 aa5.29□□□□□ -1.56
KIN28YDL108W SAC3P46674 1301 aa5.28□□□□□ -1.56
KIN28YDL108W RPL8AP17076 256 aaKnown RBP5.28□□□□□ -1.56
KIN28YDL108W CYS3P31373 394 aaKnown RBP5.28□□□□□ -1.56
KIN28YDL108W RPD3P32561 433 aa5.28□□□□□ -1.56
KIN28YDL108W STO1P34160 861 aaKnown RBP5.28□□□□□ -1.56
KIN28YDL108W YIL108WP40483 696 aaKnown RBP5.28□□□□□ -1.56
KIN28YDL108W GCV2P49095 1034 aa5.28□□□□□ -1.56
KIN28YDL108W ERO1Q03103 563 aa5.28□□□□□ -1.56
KIN28YDL108W YSH1Q06224 779 aaPredicted RBP5.28□□□□□ -1.56
KIN28YDL108W YLR352WQ06479 807 aa5.28□□□□□ -1.56
KIN28YDL108W TMA7Q3E764 64 aaKnown RBP5.28□□□□□ -1.56
KIN28YDL108W PRC1P00729 532 aa5.27□□□□□ -1.57
KIN28YDL108W SRD1P09007 221 aa5.27□□□□□ -1.57
KIN28YDL108W RAD18P10862 487 aa5.27□□□□□ -1.57
KIN28YDL108W HOM3P10869 527 aa5.27□□□□□ -1.57
KIN28YDL108W RNQ1P25367 405 aa5.27□□□□□ -1.57
KIN28YDL108W ANP1P32629 500 aa5.27□□□□□ -1.57
KIN28YDL108W APL2P36000 726 aaPredicted RBP5.27□□□□□ -1.57
KIN28YDL108W NPR3P38742 1146 aa5.27□□□□□ -1.57
KIN28YDL108W UBP5P39944 805 aa5.27□□□□□ -1.57
KIN28YDL108W SHR5P41912 237 aa5.27□□□□□ -1.57
KIN28YDL108W ALY2P47029 1046 aa5.27□□□□□ -1.57
KIN28YDL108W HDA1P53973 706 aa5.27□□□□□ -1.57
KIN28YDL108W GCN5Q03330 439 aa5.27□□□□□ -1.57
KIN28YDL108W LRS4Q04087 347 aaKnown RBP5.27□□□□□ -1.57
KIN28YDL108W IRC3Q06683 689 aa5.27□□□□□ -1.57
KIN28YDL108W RXT3Q07458 294 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms