RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	UBC11	P52492	156 aa		3.32	□□□□□ -1.88
HMRA2	YCR096C	GDE1	Q02979	1223 aa		3.32	□□□□□ -1.88
HMRA2	YCR096C	BUL2	Q03758	920 aa	Known RBP	3.32	□□□□□ -1.88
HMRA2	YCR096C	OSW1	Q08692	278 aa		3.32	□□□□□ -1.88
HMRA2	YCR096C	TGL5	Q12043	749 aa		3.32	□□□□□ -1.88
HMRA2	YCR096C	RGT2	Q12300	763 aa		3.32	□□□□□ -1.88
HMRA2	YCR096C	RPN13	O13563	156 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	YLR415C	O13578	112 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	CLN2	P20438	545 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	VPS34	P22543	875 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	HIR1	P32479	840 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	RGT1	P32862	1170 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	NDC80	P40460	691 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	TDA9	Q04545	1251 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	FAL1	Q12099	399 aa	Known RBP	3.31	□□□□□ -1.88
HMRA2	YCR096C	HAL9	Q12180	1030 aa		3.31	□□□□□ -1.88
HMRA2	YCR096C	SIT1	P39980	628 aa		3.3	□□□□□ -1.88
HMRA2	YCR096C	STB2	P46679	850 aa		3.3	□□□□□ -1.88
HMRA2	YCR096C	DUS1	P53759	423 aa	Known RBP	3.3	□□□□□ -1.88
HMRA2	YCR096C	RPS9A	O13516	197 aa	Known RBP	3.29	□□□□□ -1.88
HMRA2	YCR096C	PTP1	P25044	335 aa		3.29	□□□□□ -1.88
HMRA2	YCR096C	NGG1	P32494	702 aa		3.29	□□□□□ -1.88
HMRA2	YCR096C	SAK1	P38990	1142 aa		3.29	□□□□□ -1.88
HMRA2	YCR096C	PZF1	P39933	429 aa		3.29	□□□□□ -1.88
HMRA2	YCR096C	PAC2	P39937	518 aa		3.29	□□□□□ -1.88
HMRA2	YCR096C	TOK1	P40310	691 aa		3.29	□□□□□ -1.88
HMRA2	YCR096C	CCM1	P48237	864 aa	Predicted RBP	3.29	□□□□□ -1.88
HMRA2	YCR096C	PFA3	P42836	336 aa		3.28	□□□□□ -1.88
HMRA2	YCR096C	KRI1	P42846	591 aa	Known RBP	3.28	□□□□□ -1.88
HMRA2	YCR096C	NET1	P47035	1189 aa		3.28	□□□□□ -1.88
HMRA2	YCR096C	MPS1	P54199	764 aa		3.28	□□□□□ -1.88
HMRA2	YCR096C	SHE9	Q04172	456 aa		3.28	□□□□□ -1.88
HMRA2	YCR096C	CIR2	Q08822	631 aa		3.28	□□□□□ -1.88
HMRA2	YCR096C	YAP1802	P53309	568 aa		3.27	□□□□□ -1.89
HMRA2	YCR096C	GLG1	P36143	616 aa		3.26	□□□□□ -1.89
HMRA2	YCR096C	BDH2	P39713	417 aa		3.26	□□□□□ -1.89
HMRA2	YCR096C	BAP3	P41815	604 aa		3.26	□□□□□ -1.89
HMRA2	YCR096C	SSY5	P47002	699 aa		3.26	□□□□□ -1.89
HMRA2	YCR096C	LCD1	Q04377	747 aa		3.26	□□□□□ -1.89
HMRA2	YCR096C	SIR3	P06701	978 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	ERG11	P10614	530 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	CYS3	P31373	394 aa	Known RBP	3.25	□□□□□ -1.89
HMRA2	YCR096C	REC104	P33323	182 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	YKL069W	P36088	180 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	LTP1	P40347	161 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	XBP1	P40489	647 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.25	□□□□□ -1.89	not detected
HMRA2	YCR096C	CTR1	P49573	406 aa		3.25	□□□□□ -1.89
HMRA2	YCR096C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
HMRA2	YCR096C	SIC1	P38634	284 aa		3.24	□□□□□ -1.89
HMRA2	YCR096C	REV7	P38927	245 aa		3.24	□□□□□ -1.89
HMRA2	YCR096C	ARG2	P40360	574 aa		3.24	□□□□□ -1.89
HMRA2	YCR096C	UBC9	P50623	157 aa	Predicted RBP	3.24	□□□□□ -1.89
HMRA2	YCR096C	YOR022C	Q12204	715 aa		3.24	□□□□□ -1.89
HMRA2	YCR096C	GPR1	Q12361	961 aa		3.24	□□□□□ -1.89
HMRA2	YCR096C	ATG11	Q12527	1178 aa		3.24	□□□□□ -1.89
HMRA2	YCR096C	PYC1	P11154	1178 aa	Known RBP	3.23	□□□□□ -1.89
HMRA2	YCR096C	HBS1	P32769	611 aa	Known RBP	3.23	□□□□□ -1.89
HMRA2	YCR096C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.23	□□□□□ -1.89	not detected
HMRA2	YCR096C	MEP2	P41948	499 aa		3.23	□□□□□ -1.89
HMRA2	YCR096C	YKL033W-A	Q86ZR7	236 aa		3.23	□□□□□ -1.89
HMRA2	YCR096C	YLR149C	Q99296	730 aa		3.23	□□□□□ -1.89
HMRA2	YCR096C	PGK1	P00560	416 aa	Known RBP	3.22	□□□□□ -1.89
HMRA2	YCR096C	MRK1	P50873	501 aa		3.22	□□□□□ -1.89
HMRA2	YCR096C	OPI10	Q08202	246 aa		3.22	□□□□□ -1.89
HMRA2	YCR096C	GEP3	Q08622	556 aa		3.22	□□□□□ -1.89
HMRA2	YCR096C	SFB3	P38810	929 aa		3.21	□□□□□ -1.9
HMRA2	YCR096C	PAN2	P53010	1115 aa	Predicted RBP	3.21	□□□□□ -1.9
HMRA2	YCR096C	TPO2	P53283	614 aa		3.21	□□□□□ -1.9
HMRA2	YCR096C	TEX1	P53851	422 aa	Known RBP	3.21	□□□□□ -1.9
HMRA2	YCR096C	ENV7	Q12003	364 aa		3.21	□□□□□ -1.9
HMRA2	YCR096C	YPR071W	Q12346	211 aa		3.21	□□□□□ -1.9
HMRA2	YCR096C	PRI2	P20457	528 aa		3.2	□□□□□ -1.9
HMRA2	YCR096C	NUP1	P20676	1076 aa		3.2	□□□□□ -1.9
HMRA2	YCR096C	HEM3	P28789	327 aa		3.2	□□□□□ -1.9
HMRA2	YCR096C	PBY1	P38254	753 aa		3.2	□□□□□ -1.9
HMRA2	YCR096C	ATG4	P53867	494 aa		3.2	□□□□□ -1.9
HMRA2	YCR096C	YCL002C	P25565	263 aa		3.19	□□□□□ -1.9
HMRA2	YCR096C	SPC29	P33419	253 aa		3.19	□□□□□ -1.9
HMRA2	YCR096C	MUP3	P38734	546 aa		3.19	□□□□□ -1.9
HMRA2	YCR096C	CCT3	P39077	534 aa	Known RBP	3.19	□□□□□ -1.9
HMRA2	YCR096C	RSP5	P39940	809 aa	Known RBP	3.19	□□□□□ -1.9
HMRA2	YCR096C	NOG2	P53742	486 aa	Known RBP	3.19	□□□□□ -1.9
HMRA2	YCR096C	RSC3	Q06639	885 aa		3.19	□□□□□ -1.9
HMRA2	YCR096C	SLK19	Q08581	821 aa	Known RBP	3.19	□□□□□ -1.9
HMRA2	YCR096C	PRC1	P00729	532 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	STE4	P18851	423 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	DAL7	P21826	554 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	MRP8	P35719	219 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	YBR259W	P38338	688 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	FMO1	P38866	432 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	MTL1	P53214	551 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	FHN1	P53279	174 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	LRS4	Q04087	347 aa	Known RBP	3.18	□□□□□ -1.9
HMRA2	YCR096C	GAD1	Q04792	585 aa		3.18	□□□□□ -1.9
HMRA2	YCR096C	TOP3	P13099	656 aa		3.17	□□□□□ -1.9
HMRA2	YCR096C	STE5	P32917	917 aa		3.17	□□□□□ -1.9
HMRA2	YCR096C	YBR284W	P38150	797 aa		3.17	□□□□□ -1.9
HMRA2	YCR096C	CWC24	P53769	259 aa		3.17	□□□□□ -1.9
HMRA2	YCR096C	RGC1	Q06108	1083 aa	Known RBP	3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms