RNA–Protein interactions for RNA: YBL061C

SKT5, Transcript of Activator of Chs3p (chitin synthase III) during vegetative growth, yeast

Gene SKT5, Length 2,091 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKT5	YBL061C	MET7	Q08645	548 aa		3.11	□□□□□ -1.91
SKT5	YBL061C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SKT5	YBL061C	SRM1	P21827	482 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	URA1	P28272	314 aa	Predicted RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	SRP101	P32916	621 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	STE13	P33894	931 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	MUM2	P38236	366 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	SIC1	P38634	284 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	MND2	P40577	368 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	SGD1	Q06132	899 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	YOR352W	Q08816	343 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	DFG16	Q99234	619 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	GLT1	Q12680	2145 aa	Known RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	GAL10	P04397	699 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	CDC9	P04819	755 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	SRD1	P09007	221 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	ENA1	P13587	1091 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	TYE7	P33122	291 aa	Predicted RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	STO1	P34160	861 aa	Known RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	POL12	P38121	705 aa	Predicted RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	CAF16	P43569	289 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	ECL1	P48235	211 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	PBP1	P53297	722 aa	Known RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	YNL193W	P53870	558 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	YNL058C	P53947	316 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	CTF4	Q01454	927 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	ENA2	Q01896	1091 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	COG8	Q04632	607 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	YPR172W	Q06608	200 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	RIX7	Q07844	837 aa	Known RBP	3.1	□□□□□ -1.91
SKT5	YBL061C	YDL177C	Q12257	170 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	ERP4	Q12450	207 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	ENA5	Q12691	1091 aa		3.1	□□□□□ -1.91
SKT5	YBL061C	ADR1	P07248	1323 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	DAL7	P21826	554 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	PEX5	P35056	612 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	MAC1	P35192	417 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	BYE1	P36106	594 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	CRP1	P38845	465 aa	Known RBP	3.09	□□□□□ -1.91
SKT5	YBL061C	OCA1	P50946	238 aa	Predicted RBP	3.09	□□□□□ -1.91
SKT5	YBL061C	TAD1	P53065	400 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	RIA1	P53893	1110 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	YKR011C	Q02209	353 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	VTC3	Q02725	835 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	RRB1	Q04225	511 aa	Known RBP	3.09	□□□□□ -1.91
SKT5	YBL061C	PSR1	Q07800	427 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	SNU66	Q12420	587 aa	Predicted RBP	3.09	□□□□□ -1.91
SKT5	YBL061C	CEX1	Q12453	761 aa		3.09	□□□□□ -1.91
SKT5	YBL061C	SAC3	P46674	1301 aa		3.09	□□□□□ -1.92
SKT5	YBL061C	CHD1	P32657	1468 aa		3.09	□□□□□ -1.92
SKT5	YBL061C	RPS9A	O13516	197 aa	Known RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	POA1	P38218	177 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	LAM1	P38851	1228 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	CEP3	P40969	608 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	SMC3	P47037	1230 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	YNR029C	P53729	429 aa	Known RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	MRPL22	P53881	309 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	HDA1	P53973	706 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	COG4	Q06096	861 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	RRP9	Q06506	573 aa	Known RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	YLR001C	Q07895	862 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	SGT2	Q12118	346 aa	Known RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	SPE1	P08432	466 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	CYS3	P31373	394 aa	Known RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	MCD4	P36051	919 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	MAL31	P38156	614 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	PES4	P39684	611 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	RAD26	P40352	1085 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	HLJ1	P48353	224 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	SNP1	Q00916	300 aa	Predicted RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	CDC45	Q08032	650 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	APC5	Q08683	685 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	YOR389W	Q08912	624 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	NFI1	Q12216	726 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	RUD3	Q12234	484 aa	Known RBP	3.08	□□□□□ -1.92
SKT5	YBL061C	NKP1	Q12493	238 aa		3.08	□□□□□ -1.92
SKT5	YBL061C	FBP1	P09201	348 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	PER1	P25625	357 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	PCL2	P25693	308 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	HOG1	P32485	435 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	GRX4	P32642	244 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	SEC6	P32844	805 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	LRG1	P35688	1017 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	YHR218W	P38899	603 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	DSN1	P40568	576 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	RLP7	P40693	322 aa	Known RBP	3.07	□□□□□ -1.92
SKT5	YBL061C	MET12	P46151	657 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	PMT3	P47190	753 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	PRP43	P53131	767 aa	Known RBP	3.07	□□□□□ -1.92
SKT5	YBL061C	SDA1	P53313	767 aa	Known RBP	3.07	□□□□□ -1.92
SKT5	YBL061C	PAP2	P53632	584 aa	Known RBP	3.07	□□□□□ -1.92
SKT5	YBL061C	YNL247W	P53852	767 aa	Known RBP	3.07	□□□□□ -1.92
SKT5	YBL061C	TIM11	P81449	96 aa	Predicted RBP	3.07	□□□□□ -1.92
SKT5	YBL061C	ADY3	Q07732	790 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	YBR182C-A	Q8TGU6	64 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	RAD18	P10862	487 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	CLN1	P20437	546 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	MSM1	P22438	575 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	TSR4	P25040	408 aa		3.07	□□□□□ -1.92
SKT5	YBL061C	BRF1	P29056	596 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms