RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 HDGFL2Q7Z4V5 671 aaPredicted RBP3.4□□□□□ -1.87
CTC1-207ENST00000580299 SULF1Q8IWU6 871 aa3.4□□□□□ -1.87
CTC1-207ENST00000580299 IFNL2Q8IZJ0 200 aa3.4□□□□□ -1.87
CTC1-207ENST00000580299 DCAF11Q8TEB1 546 aa3.4□□□□□ -1.87
CTC1-207ENST00000580299 COL26A1Q96A83 441 aa3.4□□□□□ -1.87
CTC1-207ENST00000580299 NBPF4Q96M43 638 aa3.4□□□□□ -1.87
CTC1-207ENST00000580299 TMX4Q9H1E5 349 aaPredicted RBP3.4□□□□□ -1.87
CTC1-207ENST00000580299 LAMB2P55268 1798 aa3.4□□□□□ -1.87
CTC1-207ENST00000580299 SOS1Q07889 1333 aaPredicted RBP3.4□□□□□ -1.87
CTC1-207ENST00000580299 TCF20Q9UGU0 1960 aaKnown RBP3.4□□□□□ -1.87
CTC1-207ENST00000580299 COL4A5P29400 1685 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 A0A1W2PP64 1363 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 NPC1L1Q9UHC9 1359 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 BAHCC1Q9P281 2608 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 WTIPA6NIX2 430 aaPredicted RBP3.39□□□□□ -1.87
CTC1-207ENST00000580299 ERVV-2B6SEH9 535 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 PTCD1O75127 700 aaKnown RBP3.39□□□□□ -1.87
CTC1-207ENST00000580299 FARP2O94887 1054 aaPredicted RBP3.39□□□□□ -1.87
CTC1-207ENST00000580299 MYCP01106 439 aaPredicted RBP3.39□□□□□ -1.87
CTC1-207ENST00000580299 CAPN2P17655 700 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 TNIP1Q15025 636 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 OTUD7BQ6GQQ9 843 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 NPM2Q86SE8 214 aaKnown RBP3.39□□□□□ -1.87
CTC1-207ENST00000580299 CD99L2Q8TCZ2 262 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 COG3Q96JB2 828 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 GUCD1Q96NT3 240 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 SLC4A9Q96Q91 983 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 UBE2OQ9C0C9 1292 aaKnown RBP3.39□□□□□ -1.87
CTC1-207ENST00000580299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.39□□□□□ -1.87
CTC1-207ENST00000580299 MGAMO43451 1857 aa3.39□□□□□ -1.87
CTC1-207ENST00000580299 SBNO2Q9Y2G9 1366 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 UBR2Q8IWV8 1755 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 PSME4Q14997 1843 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 ADM5C9JUS6 153 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 RGL2O15211 777 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 PPIP5K2O43314 1243 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 FOSL2P15408 326 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 PHKG2P15735 406 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 NF2P35240 595 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 CABP4P57796 275 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 INHBEP58166 350 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 SP3Q02447 781 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 TTLL12Q14166 644 aaPredicted RBP3.38□□□□□ -1.87
CTC1-207ENST00000580299 TMEM31Q5JXX7 168 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 TRPM4Q8TD43 1214 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 ADAMTS19Q8TE59 1207 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 C7orf43Q8WVR3 580 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 CDCA5Q96FF9 252 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 FAM161BQ96MY7 647 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 SETDB2Q96T68 719 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 UHRF1Q96T88 793 aaPredicted RBP3.38□□□□□ -1.87
CTC1-207ENST00000580299 MPHOSPH9Q99550 1183 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 GDF15Q99988 308 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 PLSCR2Q9NRY7 297 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 PTCH2Q9Y6C5 1203 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 CACNA1BQ00975 2339 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 FLT4P35916 1363 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 KIF24Q5T7B8 1368 aa3.38□□□□□ -1.87
CTC1-207ENST00000580299 ZSWIM8A7E2V4 1837 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 CACNA1GO43497 2377 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 DDX60LQ5H9U9 1706 aaKnown RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 MANSC4A6NHS7 340 aaPredicted RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 WDHD1O75717 1129 aaPredicted RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 EIF5P55010 431 aaKnown RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 PRMT2P55345 433 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 MKRN3Q13064 507 aaKnown RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 KIF22Q14807 665 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 MAP3K11Q16584 847 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 TBC1D9BQ66K14 1250 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 INTS5Q6P9B9 1019 aaKnown RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 MICALL2Q8IY33 904 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 SUPT20HQ8NEM7 779 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 ATXN2LQ8WWM7 1075 aaKnown RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 SHISA4Q96DD7 197 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 CDX2Q99626 313 aaPredicted RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 LRFN3Q9BTN0 628 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 VPS33BQ9H267 617 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 IGSF5Q9NSI5 407 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 TERF2IPQ9NYB0 399 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 CNOT7Q9UIV1 285 aaKnown RBP3.37□□□□□ -1.87
CTC1-207ENST00000580299 FBXO3Q9UK99 471 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 ZNRF3Q9ULT6 936 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 FAM205AQ6ZU69 1335 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 SSC5DA1L4H1 1573 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 ECM29Q5VYK3 1845 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 ZDBF2Q9HCK1 2354 aa3.37□□□□□ -1.87
CTC1-207ENST00000580299 NCAPD2Q15021 1401 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 POTEB2H3BUK9 544 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 ST18O60284 1047 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 ECM2O94769 699 aaPredicted RBP3.36□□□□□ -1.87
CTC1-207ENST00000580299 GJB1P08034 283 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 PRKAR2AP13861 404 aaKnown RBP3.36□□□□□ -1.87
CTC1-207ENST00000580299 MAGEA10P43363 369 aaPredicted RBP3.36□□□□□ -1.87
CTC1-207ENST00000580299 GJA8P48165 433 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 HIRAP54198 1017 aaPredicted RBP3.36□□□□□ -1.87
CTC1-207ENST00000580299 UBXN2AP68543 259 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 CXCL9Q07325 125 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 TBC1D10BQ4KMP7 808 aaPredicted RBP3.36□□□□□ -1.87
CTC1-207ENST00000580299 OLFM4Q6UX06 510 aa3.36□□□□□ -1.87
CTC1-207ENST00000580299 NBPF5PQ86XG9 351 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms