RNA–Protein interactions for RNA: ENST00000578567.1

CCDC58P1-201, Transcript of coiled-coil domain containing 58 pseudogene 1, humanhuman

BASIC

Gene CCDC58P1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P1-201ENST00000578567 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
CCDC58P1-201ENST00000578567 MASTLQ96GX5 879 aa10.57□□□□□ -0.72
CCDC58P1-201ENST00000578567 COL15A1P39059 1388 aa10.56□□□□□ -0.72
CCDC58P1-201ENST00000578567 EN2P19622 333 aaPredicted RBP10.56□□□□□ -0.72
CCDC58P1-201ENST00000578567 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
CCDC58P1-201ENST00000578567 PRDM6Q9NQX0 595 aa10.56□□□□□ -0.72
CCDC58P1-201ENST00000578567 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
CCDC58P1-201ENST00000578567 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
CCDC58P1-201ENST00000578567 TBC1D9BQ66K14 1250 aa10.55□□□□□ -0.72
CCDC58P1-201ENST00000578567 INTS3Q68E01 1043 aaKnown RBP10.55□□□□□ -0.72
CCDC58P1-201ENST00000578567 PCDHGA4Q9Y5G9 962 aa10.55□□□□□ -0.72
CCDC58P1-201ENST00000578567 FLT4P35916 1363 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 SLC10A3P09131 477 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 CYP19A1P11511 503 aaPredicted RBP10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 CDC37L1Q7L3B6 337 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 DNAJC10Q8IXB1 793 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 RTKN2Q8IZC4 609 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 SNED1Q8TER0 1413 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 JDP2Q8WYK2 163 aa10.54□□□□□ -0.72
CCDC58P1-201ENST00000578567 TBC1D8O95759 1140 aa10.53□□□□□ -0.72
CCDC58P1-201ENST00000578567 ZNF157P51786 506 aaPredicted RBP10.53□□□□□ -0.72
CCDC58P1-201ENST00000578567 HIRAP54198 1017 aaPredicted RBP10.53□□□□□ -0.72
CCDC58P1-201ENST00000578567 CABP4P57796 275 aa10.53□□□□□ -0.72
CCDC58P1-201ENST00000578567 PRO3102Q9H379 93 aa10.53□□□□□ -0.72
CCDC58P1-201ENST00000578567 GPRC5DQ9NZD1 345 aa10.53□□□□□ -0.72
CCDC58P1-201ENST00000578567 KIF24Q5T7B8 1368 aa10.52□□□□□ -0.72
CCDC58P1-201ENST00000578567 NUDT7P0C024 238 aa10.52□□□□□ -0.73
CCDC58P1-201ENST00000578567 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.73
CCDC58P1-201ENST00000578567 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
CCDC58P1-201ENST00000578567 ZBTB1Q9Y2K1 713 aa10.52□□□□□ -0.73
CCDC58P1-201ENST00000578567 GPR25O00155 361 aa10.51□□□□□ -0.73
CCDC58P1-201ENST00000578567 PSMD1Q99460 953 aa10.51□□□□□ -0.73
CCDC58P1-201ENST00000578567 EYA1Q99502 592 aa10.51□□□□□ -0.73
CCDC58P1-201ENST00000578567 GBA2Q9HCG7 927 aaPredicted RBP10.51□□□□□ -0.73
CCDC58P1-201ENST00000578567 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
CCDC58P1-201ENST00000578567 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 HSP90AB1P08238 724 aaKnown RBP10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 COL9A1P20849 921 aa10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 FOXK1P85037 733 aa10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 USP48Q86UV5 1035 aa10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 RYDENQ9NUL5 291 aaKnown RBP10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 KIAA0100Q14667 2235 aaKnown RBP10.5□□□□□ -0.73
CCDC58P1-201ENST00000578567 NPR1P16066 1061 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 C2orf69Q8N8R5 385 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 CNBD1Q8NA66 436 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 CEP290O15078 2479 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 ANKRD26Q9UPS8 1709 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 HTTP42858 3142 aa10.49□□□□□ -0.73
CCDC58P1-201ENST00000578567 UNC80Q8N2C7 3258 aa10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 KLRG2A4D1S0 409 aaPredicted RBP10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 FYB1O15117 783 aa10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 PTCD2Q8WV60 388 aaKnown RBP10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 LRCH3Q96II8 777 aa10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 GGNBP2Q9H3C7 697 aa10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
CCDC58P1-201ENST00000578567 RANBP2P49792 3224 aaKnown RBP10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 FKTNO75072 461 aa10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 PBX2P40425 430 aa10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 EIF5P55010 431 aaKnown RBP10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 ST5P78524 1137 aa10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 RASAL3Q86YV0 1011 aa10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 TRPM4Q8TD43 1214 aa10.47□□□□□ -0.73
CCDC58P1-201ENST00000578567 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 PLPP6Q8IY26 295 aa10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 ARMC5Q96C12 935 aa10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 EMILIN1Q9Y6C2 1016 aa10.46□□□□□ -0.73
CCDC58P1-201ENST00000578567 SCN7AQ01118 1682 aa10.46□□□□□ -0.74
CCDC58P1-201ENST00000578567 BRCA2P51587 3418 aa10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 PLA2G5P39877 138 aa10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 GMPSP49915 693 aaPredicted RBP10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 R3HDMLQ9H3Y0 253 aa10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 RAPGEFL1Q9UHV5 662 aa10.45□□□□□ -0.74
CCDC58P1-201ENST00000578567 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 NPC1L1Q9UHC9 1359 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 NPHP1O15259 732 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 CXCL9Q07325 125 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 OTOP1Q7RTM1 612 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
CCDC58P1-201ENST00000578567 POLR2AP24928 1970 aaKnown RBP10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 CDHR2Q9BYE9 1310 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 A0A087WZG4 1122 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 ST20-MTHFSA0A0A6YYL1 179 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 TM4SF4P48230 202 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 MTHFSP49914 203 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 DSG2Q14126 1118 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 NIM1KQ8IY84 436 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 TRIM17Q9Y577 477 aa10.43□□□□□ -0.74
CCDC58P1-201ENST00000578567 LAMB4A4D0S4 1761 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms