RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 ADGRF5Q8IZF2 1346 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 CCT2P78371 535 aaKnown RBP12.28□□□□□ -0.44
SEC22B-201ENST00000578049 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
SEC22B-201ENST00000578049 KRT23Q9C075 422 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 TTC14Q96N46 770 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 NF2P35240 595 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 NME9Q86XW9 330 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 STK11IPQ8N1F8 1099 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
SEC22B-201ENST00000578049 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 EIF2AK4Q9P2K8 1649 aaKnown RBP12.28□□□□□ -0.44
SEC22B-201ENST00000578049 PSMA7O14818 248 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 NBPF11Q86T75 865 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
SEC22B-201ENST00000578049 SELENOOQ9BVL4 669 aa12.28□□□□□ -0.44
SEC22B-201ENST00000578049 TRAF1Q13077 416 aa12.27□□□□□ -0.44
SEC22B-201ENST00000578049 LDHCP07864 332 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 CAPN2P17655 700 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 GTF2A1P52655 376 aaPredicted RBP12.27□□□□□ -0.45
SEC22B-201ENST00000578049 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 GNAQP50148 359 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 TRIM47Q96LD4 638 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 MINDY4BA8MYZ0 360 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 PPP1R2P41236 205 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 PIBF1Q8WXW3 757 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 LMBR1Q8WVP7 490 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 CCDC77Q9BR77 488 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
SEC22B-201ENST00000578049 PRAG1Q86YV5 1406 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 KIAA0753Q2KHM9 967 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
SEC22B-201ENST00000578049 DNAJC25Q9H1X3 360 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 SPTLC2O15270 562 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 AOX1Q06278 1338 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEC22B-201ENST00000578049 PDE4BQ07343 736 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 CNGA4Q8IV77 575 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 ZBTB43O43298 467 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 USP5P45974 858 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 MCMDC2Q4G0Z9 681 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 RASAL2Q9UJF2 1139 aa12.26□□□□□ -0.45
SEC22B-201ENST00000578049 DNM1Q05193 864 aaKnown RBP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 KIF5AQ12840 1032 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 TMOD2Q9NZR1 351 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 ZFYVE9O95405 1425 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 MYO1BO43795 1136 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 SSR1P43307 286 aaKnown RBP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 SPATA24Q86W54 205 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 MYRIPQ8NFW9 859 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 PI4KAP2A4QPH2 592 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 MCM6Q14566 821 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 HDXQ7Z353 690 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 PI4KAP1Q8N8J0 262 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 MEIS3Q99687 375 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 PAF1Q8N7H5 531 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 UHRF1BP1Q6BDS2 1440 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 POLR3DP05423 398 aaPredicted RBP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 USP26Q9BXU7 913 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 RASSF4Q9H2L5 321 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 EXOC1Q9NV70 894 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 CWC25Q9NXE8 425 aaPredicted RBP12.25□□□□□ -0.45
SEC22B-201ENST00000578049 RSPH14Q9UHP6 348 aa12.25□□□□□ -0.45
SEC22B-201ENST00000578049 VAV2P52735 878 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 BCCIPQ9P287 314 aaKnown RBP eCLIP12.24□□□□□ -0.45
SEC22B-201ENST00000578049 NOS1P29475 1434 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 USP37Q86T82 979 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 CUL5Q93034 780 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 ALG1Q9BT22 464 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 PPM1EQ8WY54 764 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 MAP3K2Q9Y2U5 619 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
SEC22B-201ENST00000578049 SPAG5Q96R06 1193 aa12.24□□□□□ -0.45
SEC22B-201ENST00000578049 NOP2P46087 812 aaKnown RBP12.23□□□□□ -0.45
SEC22B-201ENST00000578049 TRIM14Q14142 442 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 IDEP14735 1019 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 PPP4R3AQ6IN85 833 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 BICDL2A1A5D9 508 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 IL15P40933 162 aaPredicted RBP12.23□□□□□ -0.45
SEC22B-201ENST00000578049 PLEKHM2Q8IWE5 1019 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
SEC22B-201ENST00000578049 CALM1P0DP23 149 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms