RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SERPINB4P48594 390 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 FKBP5Q13451 457 aaPredicted RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 G2E3Q7L622 706 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 CEP126Q9P2H0 1117 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 AXIN2Q9Y2T1 843 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 MAP3K19Q56UN5 1328 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 CDK12Q9NYV4 1490 aaPredicted RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 CHL1O00533 1208 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 ACTN4O43707 911 aaKnown RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 CD2BP2O95400 341 aaKnown RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 MTHFSDQ2M296 383 aaKnown RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
VAPA-203ENST00000577539 DCTPP1Q9H773 170 aa6.57□□□□□ -1.36
VAPA-203ENST00000577539 TMEM2Q9UHN6 1383 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 CLTCQ00610 1675 aaKnown RBP6.56□□□□□ -1.36
VAPA-203ENST00000577539 GSPT1P15170 499 aaKnown RBP6.56□□□□□ -1.36
VAPA-203ENST00000577539 RPAP2Q8IXW5 612 aaPredicted RBP6.56□□□□□ -1.36
VAPA-203ENST00000577539 DEPDC4Q8N2C3 294 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 FAM160A2Q8N612 972 aaPredicted RBP6.56□□□□□ -1.36
VAPA-203ENST00000577539 ANKRD44Q8N8A2 993 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 C1orf216Q8TAB5 229 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 PTCH1Q13635 1447 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 GOLGA6L22H0YM25 854 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 INTS3Q68E01 1043 aaKnown RBP6.56□□□□□ -1.36
VAPA-203ENST00000577539 CEP85Q6P2H3 762 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 SH3RF1Q7Z6J0 888 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 EXOC6BQ9Y2D4 811 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 IGHA2P01877 340 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 SNX21Q969T3 373 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 PANK2Q9BZ23 570 aa6.56□□□□□ -1.36
VAPA-203ENST00000577539 CWC22Q9HCG8 908 aaKnown RBP6.56□□□□□ -1.36
VAPA-203ENST00000577539 MAP2P11137 1827 aaKnown RBP6.55□□□□□ -1.36
VAPA-203ENST00000577539 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
VAPA-203ENST00000577539 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 TSHZ3Q63HK5 1081 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 SIRT1Q96EB6 747 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 MSH6P52701 1360 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 NCOA4Q13772 614 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 NOL8Q76FK4 1167 aaKnown RBP6.55□□□□□ -1.36
VAPA-203ENST00000577539 TAS1R3Q7RTX0 852 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 GAS2L2Q8NHY3 880 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 PRM3Q9NNZ6 103 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 DLC1Q96QB1 1528 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 XRCC6P12956 609 aaKnown RBP eCLIP6.55□□□□□ -1.36
VAPA-203ENST00000577539 EIF2S2P20042 333 aaKnown RBP6.55□□□□□ -1.36
VAPA-203ENST00000577539 SDSP20132 328 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 ABTB2Q8N961 1025 aa6.55□□□□□ -1.36
VAPA-203ENST00000577539 PIK3R4Q99570 1358 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 ARHGAP33O14559 1287 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 APLP1P51693 650 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 RILPL2Q969X0 211 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 PTPRCP08575 1304 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 SEMA3FQ13275 785 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 RABEP1Q15276 862 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 SH3BP5LQ7L8J4 393 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 SIX5Q8N196 739 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 CCDC85AQ96PX6 553 aaPredicted RBP6.54□□□□□ -1.36
VAPA-203ENST00000577539 PURBQ96QR8 312 aaKnown RBP6.54□□□□□ -1.36
VAPA-203ENST00000577539 KIF2CQ99661 725 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 GNAI2P04899 355 aa6.54□□□□□ -1.36
VAPA-203ENST00000577539 CCT4P50991 539 aaKnown RBP6.54□□□□□ -1.36
VAPA-203ENST00000577539 DDX49Q9Y6V7 483 aaKnown RBP6.54□□□□□ -1.36
VAPA-203ENST00000577539 KIF20BQ96Q89 1820 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 ARHGAP4P98171 946 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 AGLP35573 1532 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 SPATA31D1Q6ZQQ2 1576 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 ST18O60284 1047 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 REC8O95072 547 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 CCDC30Q5VVM6 783 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 RTL1A6NKG5 1358 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 ANKRD26Q9UPS8 1709 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 GNAT3A8MTJ3 354 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 FAM43AQ8N2R8 423 aa6.53□□□□□ -1.36
VAPA-203ENST00000577539 USP6P35125 1406 aa6.52□□□□□ -1.36
VAPA-203ENST00000577539 VIRMAQ69YN4 1812 aaKnown RBP6.52□□□□□ -1.36
VAPA-203ENST00000577539 DIP2BQ9P265 1576 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 MRE11P49959 708 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 RAB3GAP1Q15042 981 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 TMED8Q6PL24 325 aaPredicted RBP6.52□□□□□ -1.37
VAPA-203ENST00000577539 THEMISQ8N1K5 641 aaPredicted RBP6.52□□□□□ -1.37
VAPA-203ENST00000577539 TRIM44Q96DX7 344 aaPredicted RBP6.52□□□□□ -1.37
VAPA-203ENST00000577539 ZFRQ96KR1 1074 aaKnown RBP6.52□□□□□ -1.37
VAPA-203ENST00000577539 IL1RAPL2Q9NP60 686 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 ANO2Q9NQ90 1003 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 FLT4P35916 1363 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 ERC2O15083 957 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 LAPTM4BQ86VI4 370 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 CERS3Q8IU89 383 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 USP26Q9BXU7 913 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 GRPEL1Q9HAV7 217 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 CDC42BPGQ6DT37 1551 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 TTC21AQ8NDW8 1320 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 GNAI3P08754 354 aa6.52□□□□□ -1.37
VAPA-203ENST00000577539 KCNA6P17658 529 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms