RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SNRKQ9NRH2 765 aa29.31■■■□□ 2.28
FANCA-221ENST00000566889 LRRC37A3O60309 1634 aa29.31■■■□□ 2.28
FANCA-221ENST00000566889 E4F1Q66K89 784 aaPredicted RBP29.3■■■□□ 2.28
FANCA-221ENST00000566889 TPM1P09493 284 aa29.3■■■□□ 2.28
FANCA-221ENST00000566889 HSP90AB2PQ58FF8 381 aa29.3■■■□□ 2.28
FANCA-221ENST00000566889 CEP57L1Q8IYX8 460 aa29.3■■■□□ 2.28
FANCA-221ENST00000566889 CLASRPQ8N2M8 674 aaKnown RBP29.3■■■□□ 2.28
FANCA-221ENST00000566889 TRIM34Q9BYJ4 488 aa29.3■■■□□ 2.28
FANCA-221ENST00000566889 SRRTQ9BXP5 876 aaKnown RBP29.29■■■□□ 2.28
FANCA-221ENST00000566889 STAG3Q9UJ98 1225 aa29.29■■■□□ 2.28
FANCA-221ENST00000566889 CCP110O43303 1012 aa29.29■■■□□ 2.28
FANCA-221ENST00000566889 OVOS2A0A0J9YW53 1432 aa29.29■■■□□ 2.28
FANCA-221ENST00000566889 OVOS2Q6IE36 1432 aa29.29■■■□□ 2.28
FANCA-221ENST00000566889 MAP3K19Q56UN5 1328 aa29.29■■■□□ 2.28
FANCA-221ENST00000566889 PEAK1Q9H792 1746 aa29.28■■■□□ 2.28
FANCA-221ENST00000566889 SYT10Q6XYQ8 523 aa29.28■■■□□ 2.28
FANCA-221ENST00000566889 DDX54Q8TDD1 881 aaKnown RBP29.28■■■□□ 2.28
FANCA-221ENST00000566889 BABAM1Q9NWV8 329 aa29.28■■■□□ 2.28
FANCA-221ENST00000566889 GPS2Q13227 327 aa29.27■■■□□ 2.28
FANCA-221ENST00000566889 TOB2Q14106 344 aaPredicted RBP29.27■■■□□ 2.28
FANCA-221ENST00000566889 UBXN4Q92575 508 aa29.27■■■□□ 2.28
FANCA-221ENST00000566889 KDRP35968 1356 aa29.27■■■□□ 2.28
FANCA-221ENST00000566889 ORC3Q9UBD5 711 aaPredicted RBP29.26■■■□□ 2.28
FANCA-221ENST00000566889 PHLPP2Q6ZVD8 1323 aa29.26■■■□□ 2.28
FANCA-221ENST00000566889 CCDC73Q6ZRK6 1079 aa29.26■■■□□ 2.27
FANCA-221ENST00000566889 NBPF11Q86T75 865 aa29.26■■■□□ 2.27
FANCA-221ENST00000566889 CCAR1Q8IX12 1150 aaKnown RBP29.26■■■□□ 2.27
FANCA-221ENST00000566889 HMG20BQ9P0W2 317 aa29.26■■■□□ 2.27
FANCA-221ENST00000566889 OS9Q13438 667 aaPredicted RBP29.25■■■□□ 2.27
FANCA-221ENST00000566889 NECTIN2Q92692 538 aa29.25■■■□□ 2.27
FANCA-221ENST00000566889 UBXN6Q9BZV1 441 aa29.25■■■□□ 2.27
FANCA-221ENST00000566889 RCOR1Q9UKL0 485 aa29.25■■■□□ 2.27
FANCA-221ENST00000566889 KINO60870 393 aaKnown RBP29.25■■■□□ 2.27
FANCA-221ENST00000566889 TSGA10IPQ3SY00 556 aa29.25■■■□□ 2.27
FANCA-221ENST00000566889 H3BQV1 296 aa29.24■■■□□ 2.27
FANCA-221ENST00000566889 IFFO2Q5TF58 517 aa29.24■■■□□ 2.27
FANCA-221ENST00000566889 NALCNQ8IZF0 1738 aa29.24■■■□□ 2.27
FANCA-221ENST00000566889 EFCC1Q9HA90 598 aa29.24■■■□□ 2.27
FANCA-221ENST00000566889 ATL3Q6DD88 541 aa29.23■■■□□ 2.27
FANCA-221ENST00000566889 BRF1Q92994 677 aa29.23■■■□□ 2.27
FANCA-221ENST00000566889 SFPQP23246 707 aaKnown RBP eCLIP29.22■■■□□ 2.27
FANCA-221ENST00000566889 USP31Q70CQ4 1352 aa29.22■■■□□ 2.27
FANCA-221ENST00000566889 ERC1Q8IUD2 1116 aa29.22■■■□□ 2.27
FANCA-221ENST00000566889 AOPEPQ8N6M6 819 aa29.22■■■□□ 2.27
FANCA-221ENST00000566889 NPHP4O75161 1426 aaPredicted RBP29.22■■■□□ 2.27
FANCA-221ENST00000566889 ETF1P62495 437 aaKnown RBP29.22■■■□□ 2.27
FANCA-221ENST00000566889 PLCD3Q8N3E9 789 aa29.22■■■□□ 2.27
FANCA-221ENST00000566889 LRRN4CLQ8ND94 238 aa29.22■■■□□ 2.27
FANCA-221ENST00000566889 NCKAP5LQ9HCH0 1330 aa29.21■■■□□ 2.27
FANCA-221ENST00000566889 IFIT2P09913 472 aaKnown RBP29.21■■■□□ 2.27
FANCA-221ENST00000566889 FAM160A1Q05DH4 1040 aa29.21■■■□□ 2.27
FANCA-221ENST00000566889 MTX1Q13505 466 aa29.21■■■□□ 2.27
FANCA-221ENST00000566889 SIRT1Q96EB6 747 aa29.21■■■□□ 2.27
FANCA-221ENST00000566889 BPIFA3Q9BQP9 254 aa29.21■■■□□ 2.27
FANCA-221ENST00000566889 EFCAB8A8MWE9 144 aa29.2■■■□□ 2.27
FANCA-221ENST00000566889 NMIQ13287 307 aaPredicted RBP29.2■■■□□ 2.27
FANCA-221ENST00000566889 CCDC158Q5M9N0 1113 aa29.2■■■□□ 2.27
FANCA-221ENST00000566889 TRERF1Q96PN7 1200 aa29.2■■■□□ 2.27
FANCA-221ENST00000566889 KRT32Q14532 448 aa29.2■■■□□ 2.26
FANCA-221ENST00000566889 MNS1Q8NEH6 495 aa29.2■■■□□ 2.26
FANCA-221ENST00000566889 ENGASEQ8NFI3 743 aa29.2■■■□□ 2.26
FANCA-221ENST00000566889 CWC15Q9P013 229 aaKnown RBP29.2■■■□□ 2.26
FANCA-221ENST00000566889 NBPF7P0C2Y1 421 aaPredicted RBP29.19■■■□□ 2.26
FANCA-221ENST00000566889 STK3Q13188 491 aa29.19■■■□□ 2.26
FANCA-221ENST00000566889 ARMCX5Q6P1M9 558 aa29.19■■■□□ 2.26
FANCA-221ENST00000566889 RASSF4Q9H2L5 321 aa29.19■■■□□ 2.26
FANCA-221ENST00000566889 RIMS1Q86UR5 1692 aaKnown RBP29.19■■■□□ 2.26
FANCA-221ENST00000566889 NEK11Q8NG66 645 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 NEO1Q92859 1461 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 POLR3GO15318 223 aaPredicted RBP29.18■■■□□ 2.26
FANCA-221ENST00000566889 ADD1P35611 737 aaKnown RBP29.18■■■□□ 2.26
FANCA-221ENST00000566889 HDGFL1Q5TGJ6 251 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 HOMER1Q86YM7 354 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 FAM227BQ96M60 508 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 GOLPH3LQ9H4A5 285 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 JCADQ9P266 1359 aa29.18■■■□□ 2.26
FANCA-221ENST00000566889 GNAT3A8MTJ3 354 aa29.17■■■□□ 2.26
FANCA-221ENST00000566889 TADA3O75528 432 aa29.17■■■□□ 2.26
FANCA-221ENST00000566889 NAA16Q6N069 864 aaPredicted RBP29.17■■■□□ 2.26
FANCA-221ENST00000566889 KRBA2Q6ZNG9 492 aa29.17■■■□□ 2.26
FANCA-221ENST00000566889 TCEANC2Q96MN5 208 aa29.17■■■□□ 2.26
FANCA-221ENST00000566889 JAK2O60674 1132 aa29.17■■■□□ 2.26
FANCA-221ENST00000566889 PHAXQ9H814 394 aaKnown RBP29.16■■■□□ 2.26
FANCA-221ENST00000566889 FMN2Q9NZ56 1722 aa29.16■■■□□ 2.26
FANCA-221ENST00000566889 COL9A3Q14050 684 aaPredicted RBP29.16■■■□□ 2.26
FANCA-221ENST00000566889 LRRFIP1Q32MZ4 808 aaKnown RBP29.16■■■□□ 2.26
FANCA-221ENST00000566889 BEND3Q5T5X7 828 aa29.16■■■□□ 2.26
FANCA-221ENST00000566889 TMC6Q7Z403 805 aa29.16■■■□□ 2.26
FANCA-221ENST00000566889 ZNF396Q96N95 335 aaPredicted RBP29.16■■■□□ 2.26
FANCA-221ENST00000566889 LLPHQ9BRT6 129 aaKnown RBP29.16■■■□□ 2.26
FANCA-221ENST00000566889 DNAI1Q9UI46 699 aa29.16■■■□□ 2.26
FANCA-221ENST00000566889 MED23Q9ULK4 1368 aa29.15■■■□□ 2.26
FANCA-221ENST00000566889 MYH15Q9Y2K3 1946 aa29.15■■■□□ 2.26
FANCA-221ENST00000566889 IGSF1Q8N6C5 1336 aa29.15■■■□□ 2.26
FANCA-221ENST00000566889 TNNT3P45378 269 aaPredicted RBP29.14■■■□□ 2.26
FANCA-221ENST00000566889 TAF7Q15545 349 aaPredicted RBP29.14■■■□□ 2.26
FANCA-221ENST00000566889 SMARCE1Q969G3 411 aa29.14■■■□□ 2.26
FANCA-221ENST00000566889 XPO4Q9C0E2 1151 aaKnown RBP29.14■■■□□ 2.26
FANCA-221ENST00000566889 PSD3Q9NYI0 1048 aa29.14■■■□□ 2.26
FANCA-221ENST00000566889 CHMP4AQ9BY43 222 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms