RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 UTRNP46939 3433 aa14□□□□□ -0.17
CNIH1-203ENST00000553660 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
CNIH1-203ENST00000553660 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
CNIH1-203ENST00000553660 DCTN1Q14203 1278 aa14□□□□□ -0.17
CNIH1-203ENST00000553660 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
CNIH1-203ENST00000553660 SMIM5Q71RC9 77 aa14□□□□□ -0.17
CNIH1-203ENST00000553660 ADAMTS8Q9UP79 889 aa14□□□□□ -0.17
CNIH1-203ENST00000553660 ZBTB1Q9Y2K1 713 aa14□□□□□ -0.17
CNIH1-203ENST00000553660 A0A087WZG4 1122 aa13.99□□□□□ -0.17
CNIH1-203ENST00000553660 RIPK4P57078 832 aa13.99□□□□□ -0.17
CNIH1-203ENST00000553660 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
CNIH1-203ENST00000553660 PHOX2BQ99453 314 aa13.99□□□□□ -0.17
CNIH1-203ENST00000553660 SLC24A3Q9HC58 644 aa13.99□□□□□ -0.17
CNIH1-203ENST00000553660 NARFQ9UHQ1 456 aa13.99□□□□□ -0.17
CNIH1-203ENST00000553660 COL15A1P39059 1388 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 KCNQ3O43525 872 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 ZPR1O75312 459 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 MMP10P09238 476 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
CNIH1-203ENST00000553660 THSD4Q6ZMP0 1018 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 LRCH3Q96II8 777 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 TMEM134Q9H6X4 195 aa13.98□□□□□ -0.17
CNIH1-203ENST00000553660 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
CNIH1-203ENST00000553660 SOWAHBA6NEL2 793 aa13.97□□□□□ -0.17
CNIH1-203ENST00000553660 ANP32CO43423 234 aa13.97□□□□□ -0.17
CNIH1-203ENST00000553660 C4AP0C0L4 1744 aa13.97□□□□□ -0.17
CNIH1-203ENST00000553660 DLG5Q8TDM6 1919 aa13.96□□□□□ -0.17
CNIH1-203ENST00000553660 TM4SF1P30408 202 aa13.96□□□□□ -0.17
CNIH1-203ENST00000553660 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
CNIH1-203ENST00000553660 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
CNIH1-203ENST00000553660 TGFB2P61812 414 aa13.95□□□□□ -0.18
CNIH1-203ENST00000553660 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
CNIH1-203ENST00000553660 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
CNIH1-203ENST00000553660 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
CNIH1-203ENST00000553660 GOLGB1Q14789 3259 aaKnown RBP13.94□□□□□ -0.18
CNIH1-203ENST00000553660 A1BGP04217 495 aa13.94□□□□□ -0.18
CNIH1-203ENST00000553660 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
CNIH1-203ENST00000553660 BCAMP50895 628 aa13.94□□□□□ -0.18
CNIH1-203ENST00000553660 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
CNIH1-203ENST00000553660 NLGN2Q8NFZ4 835 aa13.94□□□□□ -0.18
CNIH1-203ENST00000553660 PLSCR2Q9NRY7 297 aa13.94□□□□□ -0.18
CNIH1-203ENST00000553660 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
CNIH1-203ENST00000553660 ERBB4Q15303 1308 aa13.93□□□□□ -0.18
CNIH1-203ENST00000553660 CHL1O00533 1208 aa13.93□□□□□ -0.18
CNIH1-203ENST00000553660 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
CNIH1-203ENST00000553660 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
CNIH1-203ENST00000553660 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
CNIH1-203ENST00000553660 NLRP7Q8WX94 980 aa13.93□□□□□ -0.18
CNIH1-203ENST00000553660 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
CNIH1-203ENST00000553660 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
CNIH1-203ENST00000553660 POLRMTO00411 1230 aaKnown RBP13.92□□□□□ -0.18
CNIH1-203ENST00000553660 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
CNIH1-203ENST00000553660 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
CNIH1-203ENST00000553660 CLEC4GQ6UXB4 293 aa13.92□□□□□ -0.18
CNIH1-203ENST00000553660 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
CNIH1-203ENST00000553660 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
CNIH1-203ENST00000553660 TRIM66O15016 1216 aa13.91□□□□□ -0.18
CNIH1-203ENST00000553660 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
CNIH1-203ENST00000553660 DDR1Q08345 913 aa13.91□□□□□ -0.18
CNIH1-203ENST00000553660 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
CNIH1-203ENST00000553660 KIF13BQ9NQT8 1826 aa13.91□□□□□ -0.18
CNIH1-203ENST00000553660 PRAMEF22A3QJZ6 481 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 APAF1O14727 1248 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 CAMTA2O94983 1202 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 HOXB7P09629 217 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 NFIXQ14938 502 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 GPR162Q16538 588 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 NBPF10Q6P3W6 841 aaKnown RBP13.9□□□□□ -0.18
CNIH1-203ENST00000553660 NBPF15Q8N660 670 aa13.9□□□□□ -0.18
CNIH1-203ENST00000553660 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
CNIH1-203ENST00000553660 PTPN5P54829 565 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 AMHR2Q16671 573 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
CNIH1-203ENST00000553660 MRS2Q9HD23 443 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 TSR3Q9UJK0 312 aaKnown RBP13.89□□□□□ -0.19
CNIH1-203ENST00000553660 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
CNIH1-203ENST00000553660 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 PXDNLA1KZ92 1463 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 RNF40O75150 1001 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
CNIH1-203ENST00000553660 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
CNIH1-203ENST00000553660 NRXN2Q9P2S2 1712 aa13.87□□□□□ -0.19
CNIH1-203ENST00000553660 CARMIL3Q8ND23 1372 aa13.87□□□□□ -0.19
CNIH1-203ENST00000553660 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
CNIH1-203ENST00000553660 SERPINB2P05120 415 aa13.86□□□□□ -0.19
CNIH1-203ENST00000553660 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.19
CNIH1-203ENST00000553660 CLCN1P35523 988 aa13.86□□□□□ -0.19
CNIH1-203ENST00000553660 PPP4CP60510 307 aa13.86□□□□□ -0.19
CNIH1-203ENST00000553660 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
CNIH1-203ENST00000553660 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
CNIH1-203ENST00000553660 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms