RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 EPXP11678 715 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 ADH6P28332 368 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 HIF1AQ16665 826 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 SLC30A3Q99726 388 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 AVENQ9NQS1 362 aaPredicted RBP8.31□□□□□ -1.08
SCAF11-214ENST00000550893 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 IRS1P35568 1242 aa8.3□□□□□ -1.08
SCAF11-214ENST00000550893 RASSF7Q02833 373 aa8.3□□□□□ -1.08
SCAF11-214ENST00000550893 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
SCAF11-214ENST00000550893 OCLNQ16625 522 aa8.3□□□□□ -1.08
SCAF11-214ENST00000550893 KLK14Q9P0G3 267 aa8.3□□□□□ -1.08
SCAF11-214ENST00000550893 PTPRGP23470 1445 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 UACAQ9BZF9 1416 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 KCNQ4P56696 695 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 SNRPNP63162 240 aaKnown RBP8.29□□□□□ -1.08
SCAF11-214ENST00000550893 DGKZQ13574 1117 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 SYT9Q86SS6 491 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
SCAF11-214ENST00000550893 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 EEA1Q15075 1411 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 ASXL2Q76L83 1435 aa8.29□□□□□ -1.08
SCAF11-214ENST00000550893 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
SCAF11-214ENST00000550893 AMPD1P23109 780 aa8.28□□□□□ -1.08
SCAF11-214ENST00000550893 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
SCAF11-214ENST00000550893 IER5Q5VY09 327 aa8.28□□□□□ -1.08
SCAF11-214ENST00000550893 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
SCAF11-214ENST00000550893 BTBD6Q96KE9 485 aa8.28□□□□□ -1.08
SCAF11-214ENST00000550893 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
SCAF11-214ENST00000550893 COL17A1Q9UMD9 1497 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-214ENST00000550893 HOXB4P17483 251 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-214ENST00000550893 PODNQ7Z5L7 613 aa8.27□□□□□ -1.09
SCAF11-214ENST00000550893 RAB44Q7Z6P3 723 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-214ENST00000550893 MYO19Q96H55 970 aa8.27□□□□□ -1.09
SCAF11-214ENST00000550893 RRAGCQ9HB90 399 aa8.27□□□□□ -1.09
SCAF11-214ENST00000550893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCAF11-214ENST00000550893 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
SCAF11-214ENST00000550893 CARMIL2Q6F5E8 1435 aa8.27□□□□□ -1.09
SCAF11-214ENST00000550893 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
SCAF11-214ENST00000550893 C11orf91Q3C1V1 193 aa8.26□□□□□ -1.09
SCAF11-214ENST00000550893 KANK3Q6NY19 840 aa8.26□□□□□ -1.09
SCAF11-214ENST00000550893 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
SCAF11-214ENST00000550893 CXXC1Q9P0U4 656 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-214ENST00000550893 SLAIN2Q9P270 581 aa8.26□□□□□ -1.09
SCAF11-214ENST00000550893 CFAP43Q8NDM7 1665 aa8.26□□□□□ -1.09
SCAF11-214ENST00000550893 PHF20L1A8MW92 1017 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 SIN3BO75182 1162 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 COX20Q5RI15 118 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 CAPN12Q6ZSI9 719 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 GOLGA3Q08378 1498 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 KDM6BO15054 1643 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 ABCA9Q8IUA7 1624 aa8.25□□□□□ -1.09
SCAF11-214ENST00000550893 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 IGHA1P01876 353 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 GRNP28799 593 aaKnown RBP8.24□□□□□ -1.09
SCAF11-214ENST00000550893 IDH3AP50213 366 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 CHSY3Q70JA7 882 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 MDFIQ99750 246 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 MKNK1Q9BUB5 465 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 MKL2Q9ULH7 1088 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 ARHGAP35Q9NRY4 1499 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 WDR7Q9Y4E6 1490 aa8.24□□□□□ -1.09
SCAF11-214ENST00000550893 FRMPD1Q5SYB0 1578 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-214ENST00000550893 ELOA3DA6NLF2 546 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-214ENST00000550893 MICAL2O94851 1124 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 INPP5BP32019 993 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 ELOA3BQ3SY89 546 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 LINC00114Q6XXX2 140 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 ELOA3Q8NG57 546 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 BHMTQ93088 406 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 IFT43Q96FT9 208 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 SAP130Q9H0E3 1048 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 ATP10BO94823 1461 aa8.23□□□□□ -1.09
SCAF11-214ENST00000550893 ADARB2-AS1A8MUL3 147 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 PPP1R15AO75807 674 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-214ENST00000550893 DGKGP49619 791 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 TNFRSF25Q93038 417 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 COL26A1Q96A83 441 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 SIGLEC1Q9BZZ2 1709 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 TTC37Q6PGP7 1564 aa8.22□□□□□ -1.09
SCAF11-214ENST00000550893 ARSDP51689 593 aa8.21□□□□□ -1.1
SCAF11-214ENST00000550893 NAA30Q147X3 362 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-214ENST00000550893 C16orf46Q6P387 395 aa8.21□□□□□ -1.1
SCAF11-214ENST00000550893 PCF11O94913 1555 aaKnown RBP8.2□□□□□ -1.1
SCAF11-214ENST00000550893 OPLAHO14841 1288 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 EPB42P16452 691 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 ALAS2P22557 587 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 CCINQ13939 588 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 TREML1Q86YW5 311 aa8.2□□□□□ -1.1
SCAF11-214ENST00000550893 CDK13Q14004 1512 aaKnown RBP8.19□□□□□ -1.1
SCAF11-214ENST00000550893 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms