RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
MRPS35-204ENST00000542199 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
MRPS35-204ENST00000542199 MZF1P28698 734 aaPredicted RBP13.21□□□□□ -0.29
MRPS35-204ENST00000542199 ARSDP51689 593 aa13.21□□□□□ -0.29
MRPS35-204ENST00000542199 LBRQ14739 615 aaKnown RBP13.21□□□□□ -0.29
MRPS35-204ENST00000542199 SAMD5Q5TGI4 173 aa13.21□□□□□ -0.29
MRPS35-204ENST00000542199 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.29
MRPS35-204ENST00000542199 HCN2Q9UL51 889 aa13.21□□□□□ -0.29
MRPS35-204ENST00000542199 BRD7Q9NPI1 651 aa13.2□□□□□ -0.3
MRPS35-204ENST00000542199 EPRSP07814 1512 aaKnown RBP13.19□□□□□ -0.3
MRPS35-204ENST00000542199 H7C1W4 665 aa13.19□□□□□ -0.3
MRPS35-204ENST00000542199 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
MRPS35-204ENST00000542199 GTPBP3Q969Y2 492 aaKnown RBP13.19□□□□□ -0.3
MRPS35-204ENST00000542199 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
MRPS35-204ENST00000542199 EEA1Q15075 1411 aa13.19□□□□□ -0.3
MRPS35-204ENST00000542199 A6NHS1 94 aa13.18□□□□□ -0.3
MRPS35-204ENST00000542199 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
MRPS35-204ENST00000542199 TMC7Q7Z402 723 aa13.18□□□□□ -0.3
MRPS35-204ENST00000542199 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
MRPS35-204ENST00000542199 ASB16Q96NS5 453 aa13.18□□□□□ -0.3
MRPS35-204ENST00000542199 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
MRPS35-204ENST00000542199 ABCA8O94911 1581 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 CDC14CA4D256 554 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 ANKRD33BA6NCL7 494 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 KHNYNO15037 678 aaKnown RBP13.17□□□□□ -0.3
MRPS35-204ENST00000542199 BNIP3LO60238 219 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 FAM157BP0CG42 384 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 VEGFBP49765 207 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 FIGNL1Q6PIW4 674 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 GJD3Q8N144 294 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 ABHD17AQ96GS6 310 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 PCDHGC4Q9Y5F7 938 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 KDM6BO15054 1643 aa13.17□□□□□ -0.3
MRPS35-204ENST00000542199 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
MRPS35-204ENST00000542199 EFSO43281 561 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 IGHA2P01877 340 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 GRIN2CQ14957 1233 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
MRPS35-204ENST00000542199 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 GGNBP2Q9H3C7 697 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 NDFIP2Q9NV92 336 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 KCNMB2Q9Y691 235 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
MRPS35-204ENST00000542199 GPR25O00155 361 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 GPR182O15218 404 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 MAPTP10636 758 aaKnown RBP13.15□□□□□ -0.3
MRPS35-204ENST00000542199 TNP2Q05952 138 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 SFSWAPQ12872 951 aaKnown RBP13.15□□□□□ -0.3
MRPS35-204ENST00000542199 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 TMC1Q8TDI8 760 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.3
MRPS35-204ENST00000542199 VWA5B2Q8N398 1253 aa13.14□□□□□ -0.31
MRPS35-204ENST00000542199 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
MRPS35-204ENST00000542199 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
MRPS35-204ENST00000542199 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
MRPS35-204ENST00000542199 EPB42P16452 691 aa13.12□□□□□ -0.31
MRPS35-204ENST00000542199 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
MRPS35-204ENST00000542199 MAP3K4Q9Y6R4 1608 aa13.12□□□□□ -0.31
MRPS35-204ENST00000542199 CD33P20138 364 aa13.11□□□□□ -0.31
MRPS35-204ENST00000542199 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
MRPS35-204ENST00000542199 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
MRPS35-204ENST00000542199 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
MRPS35-204ENST00000542199 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
MRPS35-204ENST00000542199 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
MRPS35-204ENST00000542199 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
MRPS35-204ENST00000542199 PCSK2P16519 638 aa13.1□□□□□ -0.31
MRPS35-204ENST00000542199 KCNQ4P56696 695 aa13.1□□□□□ -0.31
MRPS35-204ENST00000542199 ZNF787Q6DD87 383 aa13.1□□□□□ -0.31
MRPS35-204ENST00000542199 NXF1Q9UBU9 619 aaKnown RBP13.1□□□□□ -0.31
MRPS35-204ENST00000542199 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
MRPS35-204ENST00000542199 TREHO43280 583 aa13.09□□□□□ -0.31
MRPS35-204ENST00000542199 XYLBO75191 536 aa13.09□□□□□ -0.31
MRPS35-204ENST00000542199 USP5P45974 858 aa13.09□□□□□ -0.31
MRPS35-204ENST00000542199 PDE3BQ13370 1112 aa13.08□□□□□ -0.32
MRPS35-204ENST00000542199 SV2AQ7L0J3 742 aa13.08□□□□□ -0.32
MRPS35-204ENST00000542199 NANOS1Q8WY41 292 aaKnown RBP13.08□□□□□ -0.32
MRPS35-204ENST00000542199 ATXN7L1Q9ULK2 861 aaPredicted RBP13.08□□□□□ -0.32
MRPS35-204ENST00000542199 DSC3Q14574 896 aa13.07□□□□□ -0.32
MRPS35-204ENST00000542199 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
MRPS35-204ENST00000542199 DMRTB1Q96MA1 342 aa13.07□□□□□ -0.32
MRPS35-204ENST00000542199 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
MRPS35-204ENST00000542199 ATP10BO94823 1461 aa13.07□□□□□ -0.32
MRPS35-204ENST00000542199 P4HBP07237 508 aaKnown RBP13.06□□□□□ -0.32
MRPS35-204ENST00000542199 FGFR3P22607 806 aa13.06□□□□□ -0.32
MRPS35-204ENST00000542199 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
MRPS35-204ENST00000542199 SLC30A3Q99726 388 aa13.06□□□□□ -0.32
MRPS35-204ENST00000542199 MARK1Q9P0L2 795 aa13.06□□□□□ -0.32
MRPS35-204ENST00000542199 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
MRPS35-204ENST00000542199 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 ERCC3P19447 782 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
MRPS35-204ENST00000542199 LAMC2Q13753 1193 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 ZNF438Q7Z4V0 828 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 RAB44Q7Z6P3 723 aaPredicted RBP13.05□□□□□ -0.32
MRPS35-204ENST00000542199 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
MRPS35-204ENST00000542199 KIF21BO75037 1637 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms