RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 SYNE4Q8N205 404 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 TMEM106CQ9BVX2 250 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 NYXQ9GZU5 481 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 ZNF277Q9NRM2 450 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-204ENST00000537068 MIS18AQ9NYP9 233 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 HACL1Q9UJ83 578 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 THSD7BQ9C0I4 1608 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 MAP3K15Q6ZN16 1313 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 RASSF10A6NK89 507 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 TMEM88BA6NKF7 163 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 EPHX2P34913 555 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 CNGB1Q14028 1251 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-204ENST00000537068 SLC10A5Q5PT55 438 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 GIGYF2Q6Y7W6 1299 aaKnown RBP6.96□□□□□ -1.3
SNHG1-204ENST00000537068 TTLL7Q6ZT98 887 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 MS4A4AQ96JQ5 239 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 CRAMP1Q96RY5 1269 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 VPS33BQ9H267 617 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 WBP1LQ9NX94 342 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 MKRN1Q9UHC7 482 aaKnown RBP6.96□□□□□ -1.3
SNHG1-204ENST00000537068 ERBB4Q15303 1308 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 UBN2Q6ZU65 1347 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 TAF1P21675 1872 aa6.96□□□□□ -1.3
SNHG1-204ENST00000537068 ABCC12Q96J65 1359 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 FOXN1O15353 648 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 NTSR2O95665 410 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 VEGFBP49765 207 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 PDIA6Q15084 440 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 SUSD4Q5VX71 490 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 NUTM1Q86Y26 1132 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 CNTROBQ8N137 903 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 SLC39A7Q92504 469 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 RNF123Q5XPI4 1314 aa6.95□□□□□ -1.3
SNHG1-204ENST00000537068 LRRC37AA6NMS7 1700 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 DDX60Q8IY21 1712 aaKnown RBP6.94□□□□□ -1.3
SNHG1-204ENST00000537068 FAM177BA6PVY3 158 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-204ENST00000537068 SCNN1DP51172 638 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 GOLGA2Q08379 1002 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 DEFB115Q30KQ5 88 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 JDP2Q8WYK2 163 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 RTFDC1Q9BY42 306 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-204ENST00000537068 BABAM1Q9NWV8 329 aa6.94□□□□□ -1.3
SNHG1-204ENST00000537068 RRP7AQ9Y3A4 280 aaKnown RBP6.94□□□□□ -1.3
SNHG1-204ENST00000537068 POLR2AP24928 1970 aaKnown RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 EPS15P42566 896 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 CTCFP49711 727 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 PARP10Q53GL7 1025 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 EAPPQ56P03 285 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 C3orf67Q6ZVT6 689 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 USP50Q70EL3 339 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 NGEFQ8N5V2 710 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 RBM17Q96I25 401 aaKnown RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 THUMPD2Q9BTF0 503 aaKnown RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 PNNQ9H307 717 aaKnown RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 DDX21Q9NR30 783 aaKnown RBP eCLIP6.93□□□□□ -1.31e-323■■■□□ 15.6
SNHG1-204ENST00000537068 PGAP2Q9UHJ9 254 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 METRNQ9UJH8 293 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 ATP6V0A2Q9Y487 856 aa6.93□□□□□ -1.3
SNHG1-204ENST00000537068 WDR33Q9C0J8 1336 aaKnown RBP6.93□□□□□ -1.3
SNHG1-204ENST00000537068 NEFMP07197 916 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 MYL6BP14649 208 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 GPTP24298 496 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 EIF6P56537 245 aaKnown RBP6.92□□□□□ -1.3
SNHG1-204ENST00000537068 CST9Q5W186 159 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 KIF6Q6ZMV9 814 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 PPP1R42Q7Z4L9 355 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 RPGRQ92834 1020 aaKnown RBP6.92□□□□□ -1.3
SNHG1-204ENST00000537068 NLRP3Q96P20 1036 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 ZBTB3Q9H5J0 574 aa6.92□□□□□ -1.3
SNHG1-204ENST00000537068 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-204ENST00000537068 BBOX1O75936 387 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 LBX1P52954 281 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 MAP2K1Q02750 393 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-204ENST00000537068 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNHG1-204ENST00000537068 CXCL9Q07325 125 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 SP8Q8IXZ3 490 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 LARGE2Q8N3Y3 721 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 HHIPL1Q96JK4 782 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 GPRC5DQ9NZD1 345 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 DUOX1Q9NRD9 1551 aa6.91□□□□□ -1.3
SNHG1-204ENST00000537068 PSME4Q14997 1843 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 CHL1O00533 1208 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 HSPA8P11142 646 aaKnown RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 LMOD1P29536 600 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 TIE1P35590 1138 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 TMPOP42166 694 aaKnown RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 ATN1P54259 1190 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 RIPK4P57078 832 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 KIAA2012Q0VF49 1180 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 MKRN3Q13064 507 aaKnown RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 TCIRG1Q13488 830 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 AOC3Q16853 763 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 PROSER3Q2NL68 480 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 COPS6Q7L5N1 327 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms