RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ETFBKMTQ8IXQ9 262 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 RGL4Q8IZJ4 473 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 CMTR1Q8N1G2 835 aaKnown RBP7.62□□□□□ -1.19
ITGB1-219ENST00000534049 TRPM4Q8TD43 1214 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 TRIM11Q96F44 468 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 SAP130Q9H0E3 1048 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 SUV39H2Q9H5I1 410 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 IGFLR1Q9H665 355 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 FRRS1LQ9P0K9 344 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 USTQ9Y2C2 406 aa7.62□□□□□ -1.19
ITGB1-219ENST00000534049 TNFRSF10BO14763 440 aa7.61□□□□□ -1.19
ITGB1-219ENST00000534049 RPLP1P05386 114 aaKnown RBP7.61□□□□□ -1.19
ITGB1-219ENST00000534049 NRLP54845 237 aa7.61□□□□□ -1.19
ITGB1-219ENST00000534049 C20orf204Q6ZNR8 217 aa7.61□□□□□ -1.19
ITGB1-219ENST00000534049 KRBA1A5PL33 1030 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 TMEM88BA6NKF7 163 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 SASH3O75995 380 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 PSAPP07602 524 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 SOX18P35713 384 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 PDE4CQ08493 712 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 NAA30Q147X3 362 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-219ENST00000534049 KRT25Q7Z3Z0 450 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 FAM35AQ86V20 835 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 HELQQ8TDG4 1101 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 NACC1Q96RE7 527 aa7.6□□□□□ -1.19
ITGB1-219ENST00000534049 JPH1Q9HDC5 661 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-219ENST00000534049 TLR7Q9NYK1 1049 aaKnown RBP7.6□□□□□ -1.19
ITGB1-219ENST00000534049 RGS9O75916 674 aaPredicted RBP7.59□□□□□ -1.19
ITGB1-219ENST00000534049 HOXD8P13378 290 aaPredicted RBP7.59□□□□□ -1.19
ITGB1-219ENST00000534049 NID1P14543 1247 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 TARSP26639 723 aaKnown RBP7.59□□□□□ -1.19
ITGB1-219ENST00000534049 SSFA2P28290 1259 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 ZAP70P43403 619 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 PLAURQ03405 335 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 TRIM28Q13263 835 aaKnown RBP7.59□□□□□ -1.19
ITGB1-219ENST00000534049 PSAPL1Q6NUJ1 521 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 NLRP13Q86W25 1043 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 TTC9Q92623 222 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 RBSNQ9H1K0 784 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 KCNMB2Q9Y691 235 aa7.59□□□□□ -1.19
ITGB1-219ENST00000534049 PCSK2P16519 638 aa7.58□□□□□ -1.2
ITGB1-219ENST00000534049 SPOCK3Q9BQ16 436 aa7.58□□□□□ -1.2
ITGB1-219ENST00000534049 SLAIN2Q9P270 581 aa7.58□□□□□ -1.2
ITGB1-219ENST00000534049 UBAP1LF5GYI3 381 aa7.57□□□□□ -1.2
ITGB1-219ENST00000534049 APBA3O96018 575 aa7.57□□□□□ -1.2
ITGB1-219ENST00000534049 RAC1P63000 192 aa7.57□□□□□ -1.2
ITGB1-219ENST00000534049 ALKBH2Q6NS38 261 aa7.57□□□□□ -1.2
ITGB1-219ENST00000534049 ELMSAN1Q6PJG2 1045 aa7.57□□□□□ -1.2
ITGB1-219ENST00000534049 CAPN12Q6ZSI9 719 aa7.57□□□□□ -1.2
ITGB1-219ENST00000534049 COL9A3Q14050 684 aaPredicted RBP7.56□□□□□ -1.2
ITGB1-219ENST00000534049 TRAPPC3LQ5T215 181 aa7.56□□□□□ -1.2
ITGB1-219ENST00000534049 DTWD1Q8N5C7 304 aa7.56□□□□□ -1.2
ITGB1-219ENST00000534049 SEPT3Q9UH03 358 aa7.56□□□□□ -1.2
ITGB1-219ENST00000534049 NAGPAQ9UK23 515 aa7.56□□□□□ -1.2
ITGB1-219ENST00000534049 GHRHP01286 108 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 PROCP04070 461 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 CPB1P15086 417 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 AFF1P51825 1210 aaKnown RBP7.55□□□□□ -1.2
ITGB1-219ENST00000534049 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
ITGB1-219ENST00000534049 CACTIN-AS1Q8N1I8 211 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 NUDT8Q8WV74 236 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
ITGB1-219ENST00000534049 MMP20O60882 483 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 ITGB2P05107 769 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 ELNP15502 786 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 EIF2AK2P19525 551 aaKnown RBP7.54□□□□□ -1.2
ITGB1-219ENST00000534049 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
ITGB1-219ENST00000534049 TRIP4Q15650 581 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-219ENST00000534049 NOM1Q5C9Z4 860 aaKnown RBP7.54□□□□□ -1.2
ITGB1-219ENST00000534049 TTC39BQ5VTQ0 682 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-219ENST00000534049 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 GPR152Q8TDT2 470 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 DCAF11Q8TEB1 546 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
ITGB1-219ENST00000534049 LOC102724428A0A0B4J2F2 783 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 C1QTNF9BB2RNN3 333 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 ZBTB42B2RXF5 422 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 FAM13AO94988 1023 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 SIK1P57059 783 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 CD163Q86VB7 1156 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 OR13H1Q8NG92 308 aa7.53□□□□□ -1.2
ITGB1-219ENST00000534049 GTF3C2Q8WUA4 911 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-219ENST00000534049 A0A0A0MRY4 1105 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 C9orf172C9J069 976 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 NRG1Q02297 640 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-219ENST00000534049 HYAL2Q12891 473 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 FAM26DQ5JW98 314 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 WFDC8Q8IUA0 241 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 SPACA7Q96KW9 195 aa7.52□□□□□ -1.21
ITGB1-219ENST00000534049 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
ITGB1-219ENST00000534049 ABI2Q9NYB9 513 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-219ENST00000534049 NPR3P17342 541 aa7.51□□□□□ -1.21
ITGB1-219ENST00000534049 MZF1P28698 734 aaPredicted RBP7.51□□□□□ -1.21
ITGB1-219ENST00000534049 CHRNA4P43681 627 aa7.51□□□□□ -1.21
ITGB1-219ENST00000534049 USP5P45974 858 aa7.51□□□□□ -1.21
ITGB1-219ENST00000534049 MLLT1Q03111 559 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms