RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 TMEM121BQ9BXQ6 578 aaPredicted RBP8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 CHPF2Q9P2E5 772 aa8.04□□□□□ -1.12
ATPAF1-209ENST00000529214 COL24A1Q17RW2 1714 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 TTLL13PA6NNM8 815 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 HLFQ16534 295 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 TBC1D9BQ66K14 1250 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 SYT17Q9BSW7 474 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 FHDC1Q9C0D6 1143 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 HYPKQ9NX55 129 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 ARIH1Q9Y4X5 557 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 LRP5O75197 1615 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 MAP3K15Q6ZN16 1313 aa8.03□□□□□ -1.12
ATPAF1-209ENST00000529214 POLRMTO00411 1230 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 MAP3K13O43283 966 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 SERPINB2P05120 415 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 HNRNPUQ00839 825 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 DDR1Q08345 913 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 AIMP1Q12904 312 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 MCM6Q14566 821 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 KIF6Q6ZMV9 814 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 BICDL1Q6ZP65 573 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 XAGE3Q8WTP9 111 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 SETDB2Q96T68 719 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 ZNF652Q9Y2D9 606 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 CD2APQ9Y5K6 639 aa8.02□□□□□ -1.13
ATPAF1-209ENST00000529214 PYGBP11216 843 aa8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 IRX6P78412 446 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 IRF5Q13568 498 aa8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 GIGYF2Q6Y7W6 1299 aaKnown RBP8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 ANKRD13DQ6ZTN6 518 aa8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 MFRPQ9BY79 579 aa8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 PHAXQ9H814 394 aaKnown RBP8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 C4AP0C0L4 1744 aa8.01□□□□□ -1.13
ATPAF1-209ENST00000529214 TCERG1O14776 1098 aaKnown RBP8□□□□□ -1.13
ATPAF1-209ENST00000529214 ZNF34Q8IZ26 560 aa8□□□□□ -1.13
ATPAF1-209ENST00000529214 PLBD2Q8NHP8 589 aa8□□□□□ -1.13
ATPAF1-209ENST00000529214 STK31Q9BXU1 1019 aa8□□□□□ -1.13
ATPAF1-209ENST00000529214 NIP7Q9Y221 180 aaKnown RBP eCLIP8□□□□□ -1.13
ATPAF1-209ENST00000529214 LAMB4A4D0S4 1761 aa8□□□□□ -1.13
ATPAF1-209ENST00000529214 TGFB2P61812 414 aa8□□□□□ -1.13
ATPAF1-209ENST00000529214 TCIRG1Q13488 830 aa8□□□□□ -1.13
ATPAF1-209ENST00000529214 HSP90AB3PQ58FF7 597 aa7.99□□□□□ -1.13
ATPAF1-209ENST00000529214 TPTE2Q6XPS3 522 aa7.99□□□□□ -1.13
ATPAF1-209ENST00000529214 G2E3Q7L622 706 aa7.99□□□□□ -1.13
ATPAF1-209ENST00000529214 RIC3Q7Z5B4 369 aa7.99□□□□□ -1.13
ATPAF1-209ENST00000529214 TICAM2Q86XR7 235 aa7.99□□□□□ -1.13
ATPAF1-209ENST00000529214 NLGN2Q8NFZ4 835 aa7.99□□□□□ -1.13
ATPAF1-209ENST00000529214 CARMIL3Q8ND23 1372 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 PATL2C9JE40 543 aaKnown RBP7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 DDX58O95786 925 aaKnown RBP7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 CT47B1P0C2W7 299 aaPredicted RBP7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 GPTP24298 496 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 MLLT3P42568 568 aaPredicted RBP7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 SUSD4Q5VX71 490 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 PRR5LQ6MZQ0 368 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 KSR2Q6VAB6 950 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 NBPF5PQ86XG9 351 aaPredicted RBP7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 BRIP1Q9BX63 1249 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 ZBED9Q6R2W3 1325 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 UBN2Q6ZU65 1347 aa7.98□□□□□ -1.13
ATPAF1-209ENST00000529214 A0A0G2JLW4 131 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 PI4KAP2A4QPH2 592 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 FAM177BA6PVY3 158 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 SNPHO15079 494 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 KCNA3P22001 575 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 DEKP35659 375 aaKnown RBP7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 TRIM28Q13263 835 aaKnown RBP7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 PARP10Q53GL7 1025 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 PPP1R42Q7Z4L9 355 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 NLRP10Q86W26 655 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 RASEFQ8IZ41 740 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 PI4KAP1Q8N8J0 262 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 CNBD1Q8NA66 436 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 PCMTD1Q96MG8 357 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 ISCA1Q9BUE6 129 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 NYXQ9GZU5 481 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 C10orf71Q711Q0 1435 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 ATP10DQ9P241 1426 aa7.97□□□□□ -1.13
ATPAF1-209ENST00000529214 NPHP1O15259 732 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 PPP1R37O75864 691 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 DPEP1P16444 411 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 ALDH1L2Q3SY69 923 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 CCDC24Q8N4L8 307 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 MRPL50Q8N5N7 158 aaKnown RBP7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 SSH1Q8WYL5 1049 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 METTL22Q9BUU2 404 aaPredicted RBP7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 MAP3K2Q9Y2U5 619 aa7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.96□□□□□ -1.13
ATPAF1-209ENST00000529214 SCN7AQ01118 1682 aa7.95□□□□□ -1.14
ATPAF1-209ENST00000529214 BCORQ6W2J9 1755 aa7.95□□□□□ -1.14
ATPAF1-209ENST00000529214 KLRG2A4D1S0 409 aaPredicted RBP7.95□□□□□ -1.14
ATPAF1-209ENST00000529214 ATP5J2-PTCD1G3V325 749 aa7.95□□□□□ -1.14
ATPAF1-209ENST00000529214 H0YIN7 160 aa7.95□□□□□ -1.14
ATPAF1-209ENST00000529214 NTSR2O95665 410 aa7.95□□□□□ -1.14
ATPAF1-209ENST00000529214 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms