RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 P4HBP07237 508 aaKnown RBP10.36□□□□□ -0.75
RFC1-213ENST00000512275 GPC1P35052 558 aa10.36□□□□□ -0.75
RFC1-213ENST00000512275 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
RFC1-213ENST00000512275 ZSCAN10Q96SZ4 725 aaPredicted RBP10.36□□□□□ -0.75
RFC1-213ENST00000512275 FAM129BQ96TA1 746 aa10.36□□□□□ -0.75
RFC1-213ENST00000512275 NIFKQ9BYG3 293 aaKnown RBP10.36□□□□□ -0.75
RFC1-213ENST00000512275 ZNF395Q9H8N7 513 aaPredicted RBP10.36□□□□□ -0.75
RFC1-213ENST00000512275 CABP1Q9NZU7 370 aa10.36□□□□□ -0.75
RFC1-213ENST00000512275 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
RFC1-213ENST00000512275 PPRC1Q5VV67 1664 aaKnown RBP10.36□□□□□ -0.75
RFC1-213ENST00000512275 GCC2Q8IWJ2 1684 aa10.36□□□□□ -0.75
RFC1-213ENST00000512275 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 DAPK1P53355 1430 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 PTPRKQ15262 1439 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 H3BM21 787 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
RFC1-213ENST00000512275 DSC3Q14574 896 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 RHBDD1Q8TEB9 315 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 GRIP2Q9C0E4 1043 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 HCN4Q9Y3Q4 1203 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 FANCAO15360 1455 aa10.35□□□□□ -0.75
RFC1-213ENST00000512275 CD109Q6YHK3 1445 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 C11orf91Q3C1V1 193 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 EAPPQ56P03 285 aaPredicted RBP10.34□□□□□ -0.75
RFC1-213ENST00000512275 C1orf53Q5VUE5 145 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 ETFBKMTQ8IXQ9 262 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 IRF7Q92985 503 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 PHACTR1Q9C0D0 580 aa10.34□□□□□ -0.75
RFC1-213ENST00000512275 ABCC5O15440 1437 aa10.33□□□□□ -0.76
RFC1-213ENST00000512275 GMPRP36959 345 aa10.33□□□□□ -0.76
RFC1-213ENST00000512275 DGKZQ13574 1117 aa10.33□□□□□ -0.76
RFC1-213ENST00000512275 DMRTB1Q96MA1 342 aa10.33□□□□□ -0.76
RFC1-213ENST00000512275 PLEKHH2Q8IVE3 1493 aa10.33□□□□□ -0.76
RFC1-213ENST00000512275 ARHGEF12Q9NZN5 1544 aa10.33□□□□□ -0.76
RFC1-213ENST00000512275 CCDC141Q6ZP82 1450 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 GPR182O15218 404 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 RNF144AP50876 292 aaPredicted RBP10.32□□□□□ -0.76
RFC1-213ENST00000512275 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 TMEM214Q6NUQ4 689 aaKnown RBP10.32□□□□□ -0.76
RFC1-213ENST00000512275 ATCAYQ86WG3 371 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 GJD3Q8N144 294 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 ALKBH8Q96BT7 664 aaKnown RBP10.32□□□□□ -0.76
RFC1-213ENST00000512275 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 ERBB4Q15303 1308 aa10.32□□□□□ -0.76
RFC1-213ENST00000512275 ADGRL1O94910 1474 aa10.31□□□□□ -0.76
RFC1-213ENST00000512275 MBD5Q9P267 1494 aa10.31□□□□□ -0.76
RFC1-213ENST00000512275 EFCAB2Q5VUJ9 269 aa10.31□□□□□ -0.76
RFC1-213ENST00000512275 C7orf43Q8WVR3 580 aa10.31□□□□□ -0.76
RFC1-213ENST00000512275 SHANK2Q9UPX8 1470 aa10.3□□□□□ -0.76
RFC1-213ENST00000512275 SPINT1O43278 529 aa10.3□□□□□ -0.76
RFC1-213ENST00000512275 TXLNAP40222 546 aa10.3□□□□□ -0.76
RFC1-213ENST00000512275 HNRNPMP52272 730 aaKnown RBP eCLIP10.3□□□□□ -0.76
RFC1-213ENST00000512275 C4orf17Q53FE4 359 aa10.3□□□□□ -0.76
RFC1-213ENST00000512275 IFT43Q96FT9 208 aa10.3□□□□□ -0.76
RFC1-213ENST00000512275 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
RFC1-213ENST00000512275 RECKO95980 971 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 MZF1P28698 734 aaPredicted RBP10.29□□□□□ -0.76
RFC1-213ENST00000512275 ZAP70P43403 619 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 AAMPQ13685 434 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 GNASQ5JWF2 1037 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 INSM2Q96T92 566 aaPredicted RBP10.29□□□□□ -0.76
RFC1-213ENST00000512275 POLIQ9UNA4 740 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 BCS1LQ9Y276 419 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 C9orf84Q5VXU9 1444 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 AKNAQ7Z591 1439 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 KIAA1107Q9UPP5 1409 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 KDM6BO15054 1643 aa10.29□□□□□ -0.76
RFC1-213ENST00000512275 TRAPPC8Q9Y2L5 1435 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 SPATA31C2B4DYI2 1134 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 MAN1A2O60476 641 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 UPP2O95045 317 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 BMP2P12643 396 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
RFC1-213ENST00000512275 EHHADHQ08426 723 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 ZDHHC3Q9NYG2 299 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 NEO1Q92859 1461 aa10.28□□□□□ -0.76
RFC1-213ENST00000512275 RICTORQ6R327 1708 aa10.27□□□□□ -0.76
RFC1-213ENST00000512275 INO80Q9ULG1 1556 aaPredicted RBP10.27□□□□□ -0.76
RFC1-213ENST00000512275 SCAPERQ9BY12 1400 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 PDGFAP04085 211 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 TCF3P15923 654 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 PLA2G4AP47712 749 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 RRP7BPQ9NSQ0 103 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 ADGRL2O95490 1459 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 ZFYVE16Q7Z3T8 1539 aa10.27□□□□□ -0.77
RFC1-213ENST00000512275 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 SETD5Q9C0A6 1442 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 TEX14Q8IWB6 1497 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 USP5P45974 858 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 MRPL58Q14197 206 aaKnown RBP10.26□□□□□ -0.77
RFC1-213ENST00000512275 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms