RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 BCAMP50895 628 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 AOC3Q16853 763 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 MICALL2Q8IY33 904 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 NIM1KQ8IY84 436 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 TMC1Q8TDI8 760 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 GGNBP2Q9H3C7 697 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 ZNRF3Q9ULT6 936 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 TBC1D2BQ9UPU7 963 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 PTCH2Q9Y6C5 1203 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 REV3LO60673 3130 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 LAMB2P55268 1798 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 ABCC12Q96J65 1359 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 WASHC2AQ641Q2 1341 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 PPIP5K2O43314 1243 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 FKBP1BP68106 108 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 SLC39A6Q13433 755 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 SLC4A8Q2Y0W8 1093 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 CC2D2BQ6DHV5 1058 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 FAM109BQ6ICB4 259 aaPredicted RBP4.8□□□□□ -1.64
TCOF1-208ENST00000506063 SETDB2Q96T68 719 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 NUP98P52948 1817 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 LRRC37AA6NMS7 1700 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 DDX60Q8IY21 1712 aaKnown RBP4.8□□□□□ -1.64
TCOF1-208ENST00000506063 DCHS1Q96JQ0 3298 aa4.8□□□□□ -1.64
TCOF1-208ENST00000506063 CACNA1GO43497 2377 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 TCF20Q9UGU0 1960 aaKnown RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 UBE2Q2LH0YL09 131 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 IGF2BP3O00425 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 RAD17O75943 681 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 ALDH1B1P30837 517 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 HOXA10P31260 410 aaPredicted RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 MKRN3Q13064 507 aaKnown RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 MTFR1Q15390 333 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 SLC9C1Q4G0N8 1177 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 TBC1D10BQ4KMP7 808 aaPredicted RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 ZNF530Q6P9A1 599 aaPredicted RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 IFNL1Q8IU54 200 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 VSIG10Q8N0Z9 540 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 DPF2Q92785 391 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 SYMPKQ92797 1274 aaKnown RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 ERO1AQ96HE7 468 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 RTFDC1Q9BY42 306 aaPredicted RBP4.79□□□□□ -1.64
TCOF1-208ENST00000506063 EFCC1Q9HA90 598 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 GGA3Q9NZ52 723 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 NR2E3Q9Y5X4 410 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 USP34Q70CQ2 3546 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 CACNA1BQ00975 2339 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 XIRP2A4UGR9 3374 aa4.79□□□□□ -1.64
TCOF1-208ENST00000506063 DNAH12Q6ZR08 3092 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 RAB3GAP2Q9H2M9 1393 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 MYO9BQ13459 2157 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 KIF7Q2M1P5 1343 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 COL3A1P02461 1466 aaPredicted RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 A0A087WZG4 1122 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 ST20-MTHFSA0A0A6YYL1 179 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 PRAMEF22A3QJZ6 481 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 H7C1D1 291 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 MYCP01106 439 aaPredicted RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 MTHFSP49914 203 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 KIAA2012Q0VF49 1180 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 SREBF2Q12772 1141 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 CRHR2Q13324 411 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 ALYREFQ86V81 257 aaKnown RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 NBPF5PQ86XG9 351 aaPredicted RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 MAFAQ8NHW3 353 aaPredicted RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 SH3TC2Q8TF17 1288 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 DCPSQ96C86 337 aaKnown RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 PUS7Q96PZ0 661 aaKnown RBP4.78□□□□□ -1.64
TCOF1-208ENST00000506063 HTATIP2Q9BUP3 242 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 BCL2L13Q9BXK5 485 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 VPS33BQ9H267 617 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 SLC52A2Q9HAB3 445 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 C5orf42Q9H799 3197 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 ZDBF2Q9HCK1 2354 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 ANKRD36CQ5JPF3 1778 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 RTL9Q8NET4 1388 aa4.78□□□□□ -1.64
TCOF1-208ENST00000506063 ALDH1A1P00352 501 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 IL6STP40189 918 aaPredicted RBP4.77□□□□□ -1.65
TCOF1-208ENST00000506063 GJA8P48165 433 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 EIF4A2Q14240 407 aaKnown RBP4.77□□□□□ -1.65
TCOF1-208ENST00000506063 GRIPAP1Q4V328 841 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 SPRYD7Q5W111 196 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 TDHQ8IZJ6 230 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 LGR6Q9HBX8 967 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 PKD1L2Q7Z442 2459 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 COL4A1P02462 1669 aa4.77□□□□□ -1.65
TCOF1-208ENST00000506063 IRS2Q9Y4H2 1338 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 PSMD14O00487 310 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 PPEF1O14829 653 aaPredicted RBP4.76□□□□□ -1.65
TCOF1-208ENST00000506063 MGAMO43451 1857 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 SP3Q02447 781 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 PTPN12Q05209 780 aaKnown RBP4.76□□□□□ -1.65
TCOF1-208ENST00000506063 TNIP1Q15025 636 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 KIF4BQ2VIQ3 1234 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 TJAP1Q5JTD0 557 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 LDLRAD1Q5T700 205 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 CLEC4GQ6UXB4 293 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 C3orf67Q6ZVT6 689 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 NBPF11Q86T75 865 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms