RNA–Protein interactions for RNA: ENST00000503620.1

PAPD4-206, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-206ENST00000503620 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
PAPD4-206ENST00000503620 PRUNE2Q8WUY3 3088 aa11.32□□□□□ -0.6
PAPD4-206ENST00000503620 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
PAPD4-206ENST00000503620 HLFQ16534 295 aa11.32□□□□□ -0.6
PAPD4-206ENST00000503620 TBC1D10BQ4KMP7 808 aaPredicted RBP11.32□□□□□ -0.6
PAPD4-206ENST00000503620 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
PAPD4-206ENST00000503620 ZNF333Q96JL9 665 aa11.32□□□□□ -0.6
PAPD4-206ENST00000503620 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
PAPD4-206ENST00000503620 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
PAPD4-206ENST00000503620 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
PAPD4-206ENST00000503620 SLC24A1O60721 1099 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
PAPD4-206ENST00000503620 NBPF10Q6P3W6 841 aaKnown RBP11.31□□□□□ -0.6
PAPD4-206ENST00000503620 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
PAPD4-206ENST00000503620 ZNF609O15014 1411 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 FAM177BA6PVY3 158 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 H7C1D1 291 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 KCNQ3O43525 872 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 FKBP1BP68106 108 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 TNIP1Q15025 636 aa11.3□□□□□ -0.6
PAPD4-206ENST00000503620 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
PAPD4-206ENST00000503620 SIPA1L3O60292 1781 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-206ENST00000503620 LAMA2P24043 3122 aaKnown RBP11.3□□□□□ -0.6
PAPD4-206ENST00000503620 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
PAPD4-206ENST00000503620 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
PAPD4-206ENST00000503620 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
PAPD4-206ENST00000503620 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
PAPD4-206ENST00000503620 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
PAPD4-206ENST00000503620 PSMD14O00487 310 aa11.28□□□□□ -0.6
PAPD4-206ENST00000503620 UBE2Q1Q7Z7E8 422 aa11.28□□□□□ -0.6
PAPD4-206ENST00000503620 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
PAPD4-206ENST00000503620 DCPSQ96C86 337 aaKnown RBP11.28□□□□□ -0.6
PAPD4-206ENST00000503620 SHISA4Q96DD7 197 aa11.27□□□□□ -0.61
PAPD4-206ENST00000503620 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
PAPD4-206ENST00000503620 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
PAPD4-206ENST00000503620 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.61
PAPD4-206ENST00000503620 IBTKQ9P2D0 1353 aaPredicted RBP11.27□□□□□ -0.61
PAPD4-206ENST00000503620 PIEZO1Q92508 2521 aa11.27□□□□□ -0.61
PAPD4-206ENST00000503620 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
PAPD4-206ENST00000503620 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
PAPD4-206ENST00000503620 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
PAPD4-206ENST00000503620 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
PAPD4-206ENST00000503620 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
PAPD4-206ENST00000503620 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
PAPD4-206ENST00000503620 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
PAPD4-206ENST00000503620 RBM17Q96I25 401 aaKnown RBP11.25□□□□□ -0.61
PAPD4-206ENST00000503620 FMNL2Q96PY5 1086 aa11.25□□□□□ -0.61
PAPD4-206ENST00000503620 ABCC4O15439 1325 aa11.25□□□□□ -0.61
PAPD4-206ENST00000503620 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
PAPD4-206ENST00000503620 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
PAPD4-206ENST00000503620 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
PAPD4-206ENST00000503620 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
PAPD4-206ENST00000503620 IGF2BP3O00425 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
PAPD4-206ENST00000503620 NTSR2O95665 410 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 RPS12P25398 132 aaKnown RBP11.23□□□□□ -0.61
PAPD4-206ENST00000503620 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
PAPD4-206ENST00000503620 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
PAPD4-206ENST00000503620 ANGEL2Q5VTE6 544 aaKnown RBP11.23□□□□□ -0.61
PAPD4-206ENST00000503620 SUSD4Q5VX71 490 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 Q7L0L9 218 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 CD99L2Q8TCZ2 262 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 SCN9AQ15858 1988 aa11.23□□□□□ -0.61
PAPD4-206ENST00000503620 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
PAPD4-206ENST00000503620 DPP8Q6V1X1 898 aaPredicted RBP11.22□□□□□ -0.61
PAPD4-206ENST00000503620 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
PAPD4-206ENST00000503620 MTMR10Q9NXD2 777 aa11.22□□□□□ -0.61
PAPD4-206ENST00000503620 SCAF8Q9UPN6 1271 aaKnown RBP11.22□□□□□ -0.61
PAPD4-206ENST00000503620 BDP1A6H8Y1 2624 aa11.22□□□□□ -0.61
PAPD4-206ENST00000503620 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 LAMB1P07942 1786 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
PAPD4-206ENST00000503620 PTPN12Q05209 780 aaKnown RBP11.21□□□□□ -0.61
PAPD4-206ENST00000503620 SCARF1Q14162 830 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 MPNDQ8N594 471 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 RAPGEFL1Q9UHV5 662 aa11.21□□□□□ -0.61
PAPD4-206ENST00000503620 LRRC37AA6NMS7 1700 aa11.21□□□□□ -0.62
PAPD4-206ENST00000503620 ALDH1A1P00352 501 aa11.2□□□□□ -0.62
PAPD4-206ENST00000503620 VIL1P09327 827 aaKnown RBP11.2□□□□□ -0.62
PAPD4-206ENST00000503620 HMOX1P09601 288 aa11.2□□□□□ -0.62
PAPD4-206ENST00000503620 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
PAPD4-206ENST00000503620 SLC10A5Q5PT55 438 aa11.2□□□□□ -0.62
PAPD4-206ENST00000503620 LDLRAD1Q5T700 205 aa11.2□□□□□ -0.62
PAPD4-206ENST00000503620 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
PAPD4-206ENST00000503620 ZNF34Q8IZ26 560 aa11.2□□□□□ -0.62
PAPD4-206ENST00000503620 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
PAPD4-206ENST00000503620 DBNDD1Q9H9R9 158 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms