RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
COPS3-209ENST00000486810 GGNBP2Q9H3C7 697 aa8.54□□□□□ -1.04
COPS3-209ENST00000486810 H3BRB1 525 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 FAM13AO94988 1023 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 MAP3K6O95382 1288 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 ADH7P40394 386 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 ARHGAP4P98171 946 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 DNM1Q05193 864 aaKnown RBP8.53□□□□□ -1.04
COPS3-209ENST00000486810 PNMA5Q96PV4 448 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
COPS3-209ENST00000486810 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 CCDC87Q9NVE4 849 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 POLIQ9UNA4 740 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 CNTNAP5Q8WYK1 1306 aa8.53□□□□□ -1.04
COPS3-209ENST00000486810 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 A6NHS1 94 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 MMP20O60882 483 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 RARAP10276 462 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
COPS3-209ENST00000486810 UBE2OQ9C0C9 1292 aaKnown RBP8.52□□□□□ -1.05
COPS3-209ENST00000486810 DNAJB12Q9NXW2 375 aaKnown RBP8.52□□□□□ -1.05
COPS3-209ENST00000486810 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 NAGPAQ9UK23 515 aa8.52□□□□□ -1.05
COPS3-209ENST00000486810 MZF1P28698 734 aaPredicted RBP8.51□□□□□ -1.05
COPS3-209ENST00000486810 DGKGP49619 791 aa8.51□□□□□ -1.05
COPS3-209ENST00000486810 GSK3AP49840 483 aa8.51□□□□□ -1.05
COPS3-209ENST00000486810 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
COPS3-209ENST00000486810 NLRP13Q86W25 1043 aa8.51□□□□□ -1.05
COPS3-209ENST00000486810 CCER1Q8TC90 406 aaPredicted RBP8.51□□□□□ -1.05
COPS3-209ENST00000486810 IGFLR1Q9H665 355 aa8.51□□□□□ -1.05
COPS3-209ENST00000486810 SLC6A14Q9UN76 642 aa8.51□□□□□ -1.05
COPS3-209ENST00000486810 SOWAHDA6NJG2 315 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 TBC1D8BQ0IIM8 1120 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 ALKBH2Q6NS38 261 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 GLYCTKQ8IVS8 523 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 TRPM4Q8TD43 1214 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 TLR7Q9NYK1 1049 aaKnown RBP8.5□□□□□ -1.05
COPS3-209ENST00000486810 TMEM63CQ9P1W3 806 aa8.5□□□□□ -1.05
COPS3-209ENST00000486810 ALBP02768 609 aa8.49□□□□□ -1.05
COPS3-209ENST00000486810 MLLT1Q03111 559 aaPredicted RBP8.49□□□□□ -1.05
COPS3-209ENST00000486810 COL9A3Q14050 684 aaPredicted RBP8.49□□□□□ -1.05
COPS3-209ENST00000486810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.49□□□□□ -1.05
COPS3-209ENST00000486810 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
COPS3-209ENST00000486810 AMPD1P23109 780 aa8.48□□□□□ -1.05
COPS3-209ENST00000486810 MARSP56192 900 aaKnown RBP8.48□□□□□ -1.05
COPS3-209ENST00000486810 COL13A1Q5TAT6 717 aaPredicted RBP8.48□□□□□ -1.05
COPS3-209ENST00000486810 XKR5Q6UX68 686 aa8.48□□□□□ -1.05
COPS3-209ENST00000486810 MICALL1Q8N3F8 863 aa8.48□□□□□ -1.05
COPS3-209ENST00000486810 CYP2E1P05181 493 aaPredicted RBP8.47□□□□□ -1.05
COPS3-209ENST00000486810 HOXD8P13378 290 aaPredicted RBP8.47□□□□□ -1.05
COPS3-209ENST00000486810 ALAS2P22557 587 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 GPLD1P80108 840 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 PLAURQ03405 335 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 KCNA1Q09470 495 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 GJD3Q8N144 294 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 OR13H1Q8NG92 308 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 ELP3Q9H9T3 547 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 RRAGCQ9HB90 399 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 CNTN3Q9P232 1028 aa8.47□□□□□ -1.05
COPS3-209ENST00000486810 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
COPS3-209ENST00000486810 NRLP54845 237 aa8.46□□□□□ -1.06
COPS3-209ENST00000486810 AAMPQ13685 434 aa8.46□□□□□ -1.06
COPS3-209ENST00000486810 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
COPS3-209ENST00000486810 HFE2Q6ZVN8 426 aa8.46□□□□□ -1.06
COPS3-209ENST00000486810 M0R082 166 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 SOX18P35713 384 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 C8orf34Q49A92 452 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 PERM1Q5SV97 790 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 KANK3Q6NY19 840 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 FAM9AQ8IZU1 332 aaPredicted RBP8.45□□□□□ -1.06
COPS3-209ENST00000486810 ZNF417Q8TAU3 575 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 ZNF587Q96SQ5 575 aaPredicted RBP8.45□□□□□ -1.06
COPS3-209ENST00000486810 LPIN3Q9BQK8 851 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 CHRDQ9H2X0 955 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 SUV39H2Q9H5I1 410 aa8.45□□□□□ -1.06
COPS3-209ENST00000486810 ABI2Q9NYB9 513 aaPredicted RBP8.45□□□□□ -1.06
COPS3-209ENST00000486810 J3QW42 95 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 IGHA2P01877 340 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 PSAPP07602 524 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 PDIA4P13667 645 aaKnown RBP8.44□□□□□ -1.06
COPS3-209ENST00000486810 CPB1P15086 417 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 GRIK5Q16478 980 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 PSAPL1Q6NUJ1 521 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 ZNF438Q7Z4V0 828 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 FAM35AQ86V20 835 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 C1orf127Q8N9H9 656 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
COPS3-209ENST00000486810 SCARF2Q96GP6 870 aaPredicted RBP8.44□□□□□ -1.06
COPS3-209ENST00000486810 NSUN5Q96P11 429 aaKnown RBP8.44□□□□□ -1.06
COPS3-209ENST00000486810 RPLP1P05386 114 aaKnown RBP8.43□□□□□ -1.06
COPS3-209ENST00000486810 IRS1P35568 1242 aa8.43□□□□□ -1.06
COPS3-209ENST00000486810 BEND7Q8N7W2 519 aaPredicted RBP8.43□□□□□ -1.06
COPS3-209ENST00000486810 NUDT8Q8WV74 236 aa8.43□□□□□ -1.06
COPS3-209ENST00000486810 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
COPS3-209ENST00000486810 FOXD3Q9UJU5 478 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms