RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 SUSD3Q96L08 255 aa3.7□□□□□ -1.82
RPL39P40-201ENST00000445481 PHACTR1Q9C0D0 580 aa3.7□□□□□ -1.82
RPL39P40-201ENST00000445481 DNAJB12Q9NXW2 375 aaKnown RBP3.7□□□□□ -1.82
RPL39P40-201ENST00000445481 NCAPD3P42695 1498 aa3.7□□□□□ -1.82
RPL39P40-201ENST00000445481 ZBTB7BO15156 539 aaPredicted RBP3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 GRNP28799 593 aaKnown RBP3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 RAC1P63000 192 aa3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 NFKBIBQ15653 356 aa3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 FTSJ3Q8IY81 847 aaKnown RBP3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 ISY1Q9ULR0 285 aaKnown RBP3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 NOD1Q9Y239 953 aa3.69□□□□□ -1.82
RPL39P40-201ENST00000445481 KIF20AO95235 890 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 CLDN10P78369 228 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 GRIK5Q16478 980 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 B4GALNT3Q6L9W6 998 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 TPCN2Q8NHX9 752 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 GAS2L2Q8NHY3 880 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 RRAGDQ9NQL2 400 aaPredicted RBP3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 RNF112Q9ULX5 631 aa3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 LAS1LQ9Y4W2 734 aaKnown RBP3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 GPC6Q9Y625 555 aaPredicted RBP3.68□□□□□ -1.82
RPL39P40-201ENST00000445481 CUX2O14529 1486 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 GOLGA6L3A6NEY3 463 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 USP17L5A8MUK1 530 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 ZBTB42B2RXF5 422 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 C21orf2O43822 256 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 DEAF1O75398 565 aaPredicted RBP3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 ALX3O95076 343 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 HSP90B1P14625 803 aaKnown RBP3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 CPB1P15086 417 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 NFKB1P19838 968 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 SSTR4P31391 388 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 RGS3P49796 1198 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 PSMA6P60900 246 aaKnown RBP3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 HNRNPUQ00839 825 aaKnown RBP eCLIP3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 POTEAQ6S8J7 498 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 BTLAQ7Z6A9 289 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 TSEN2Q8NCE0 465 aaKnown RBP3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 TRIM44Q96DX7 344 aaPredicted RBP3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 LPIN3Q9BQK8 851 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 GSX2Q9BZM3 304 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 RNF123Q5XPI4 1314 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 ZBED9Q6R2W3 1325 aa3.67□□□□□ -1.82
RPL39P40-201ENST00000445481 RGS9O75916 674 aaPredicted RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 MED26O95402 600 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 MLLT1Q03111 559 aaPredicted RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 DDX10Q13206 875 aaKnown RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 WASHC4Q2M389 1173 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 PERM1Q5SV97 790 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 C1orf53Q5VUE5 145 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 MSL1Q68DK7 614 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 PRR23CQ6ZRP0 262 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 NPM2Q86SE8 214 aaKnown RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 FBXO11Q86XK2 927 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 ALDH16A1Q8IZ83 802 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 DCAF11Q8TEB1 546 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 NGLY1Q96IV0 654 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 ARID3AQ99856 593 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 GTPBP4Q9BZE4 634 aaKnown RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 CHMP4BQ9H444 224 aaKnown RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 ALG2Q9H553 416 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 PRM3Q9NNZ6 103 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 PCMTD2Q9NV79 361 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 ZFATQ9P243 1243 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 BCS1LQ9Y276 419 aa3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 COL17A1Q9UMD9 1497 aaPredicted RBP3.66□□□□□ -1.82
RPL39P40-201ENST00000445481 NACADO15069 1562 aa3.65□□□□□ -1.82
RPL39P40-201ENST00000445481 RB1CC1Q8TDY2 1594 aa3.65□□□□□ -1.82
RPL39P40-201ENST00000445481 LGR5O75473 907 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 LETM1O95202 739 aaPredicted RBP3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 PTMSP20962 102 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 HIRAP54198 1017 aaPredicted RBP3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 DMTNQ08495 405 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 CCDC102BQ68D86 513 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 KRT25Q7Z3Z0 450 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 FAM35AQ86V20 835 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 CHMP4AQ9BY43 222 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 BACH2Q9BYV9 841 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 ANKIB1Q9P2G1 1089 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 ABCC9O60706 1549 aa3.65□□□□□ -1.83
RPL39P40-201ENST00000445481 SMG6Q86US8 1419 aaKnown RBP3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 PPP1R12BO60237 982 aaPredicted RBP3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 ADAMTS4O75173 837 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 DKK1O94907 266 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 FSTP19883 344 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 SOX11P35716 441 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 CD97P48960 835 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 IRX6P78412 446 aaPredicted RBP3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 SLC20A2Q08357 652 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 ADAMTS19Q8TE59 1207 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 DMGDHQ9UI17 866 aaKnown RBP3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 COG6Q9Y2V7 657 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 OAS3Q9Y6K5 1087 aaKnown RBP3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 CEP164Q9UPV0 1460 aa3.64□□□□□ -1.83
RPL39P40-201ENST00000445481 FSD2A1L4K1 749 aa3.63□□□□□ -1.83
RPL39P40-201ENST00000445481 POM121CA8CG34 1229 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms