RNA–Protein interactions for RNA: ENST00000438326.2

PMS2P3-206, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-206ENST00000438326 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 HHIPL1Q96JK4 782 aa6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 CAPNS2Q96L46 248 aa6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 PGAP2Q9UHJ9 254 aa6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 TLL2Q9Y6L7 1015 aa6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 SCN9AQ15858 1988 aa6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 ZNF609O15014 1411 aa6.93□□□□□ -1.3
PMS2P3-206ENST00000438326 POLR2AP24928 1970 aaKnown RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 CHL1O00533 1208 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 ZBTB22O15209 634 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 CA12O43570 354 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 EIF2S2P20042 333 aaKnown RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 MAP2K2P36507 400 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 GMPSP49915 693 aaPredicted RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 CXCL9Q07325 125 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 TCIRG1Q13488 830 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 GRAPQ13588 217 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 TNIP1Q15025 636 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 CST9Q5W186 159 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 CIAPIN1Q6FI81 312 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 DDX46Q7L014 1031 aaKnown RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 COPS6Q7L5N1 327 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 MPNDQ8N594 471 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 GRAPLQ8TC17 118 aaPredicted RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 XAGE3Q8WTP9 111 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 COL4A1P02462 1669 aa6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 MYBBP1AQ9BQG0 1328 aaKnown RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 ZNF646O15015 1829 aaPredicted RBP6.92□□□□□ -1.3
PMS2P3-206ENST00000438326 AKAP11Q9UKA4 1901 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 TRAF5O00463 557 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 TCERG1O14776 1098 aaKnown RBP6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 ANXA1P04083 346 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 BRPF1P55201 1214 aaPredicted RBP6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 SAPCD2Q86UD0 394 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 PLBD2Q8NHP8 589 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 ABHD8Q96I13 439 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 GPR101Q96P66 508 aaPredicted RBP6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 BEGAINQ9BUH8 593 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 TRMT112Q9UI30 125 aaKnown RBP6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 SPEF2Q9C093 1822 aa6.91□□□□□ -1.3
PMS2P3-206ENST00000438326 CASP8AP2Q9UKL3 1982 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 YDJCA8MPS7 323 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 CELF2O95319 508 aaKnown RBP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 HCLS1P14317 486 aaPredicted RBP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 FMR1Q06787 632 aaKnown RBP eCLIP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 SF3B3Q15393 1217 aaKnown RBP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 HDGFL1Q5TGJ6 251 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 CYP4F22Q6NT55 531 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 PAXIP1Q6ZW49 1069 aaPredicted RBP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 CDC37L1Q7L3B6 337 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 DPF2Q92785 391 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 RUNDC1Q96C34 613 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 RNF216Q9NWF9 866 aaPredicted RBP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 CHPF2Q9P2E5 772 aa6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 DBF4Q9UBU7 674 aaPredicted RBP6.9□□□□□ -1.3
PMS2P3-206ENST00000438326 PAPPA2Q9BXP8 1791 aa6.9□□□□□ -1.31
PMS2P3-206ENST00000438326 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 RAD17O75943 681 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 RPS12P25398 132 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 AIMP1Q12904 312 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 NOGQ13253 232 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 MICALL2Q8IY33 904 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 BCL2L13Q9BXK5 485 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 GLIS2Q9BZE0 524 aaPredicted RBP6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 HYPKQ9NX55 129 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 TRIM35Q9UPQ4 493 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 LAMB1P07942 1786 aa6.89□□□□□ -1.31
PMS2P3-206ENST00000438326 A0A1B0GUL6 1792 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 RTL9Q8NET4 1388 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 H7C1D1 291 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 HSP90B1P14625 803 aaKnown RBP6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 WDR43Q15061 677 aaKnown RBP eCLIP6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 KRT24Q2M2I5 525 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 WASHC4Q2M389 1173 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 ANKRD13DQ6ZTN6 518 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 NECTIN2Q92692 538 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 CELF1Q92879 486 aaKnown RBP6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 CFAP44Q96MT7 982 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 EYA3Q99504 573 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 FOXD4L1Q9NU39 408 aa6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 CNOT7Q9UIV1 285 aaKnown RBP6.88□□□□□ -1.31
PMS2P3-206ENST00000438326 ECM29Q5VYK3 1845 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 PSMD14O00487 310 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 IRS4O14654 1257 aaPredicted RBP6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 ECE2O60344 883 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 AOC2O75106 756 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 RGS19P49795 217 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 GPSM2P81274 684 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 GOLGA2Q08379 1002 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 GRM1Q13255 1194 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 CCDC146Q8IYE0 955 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 ZBTB38Q8NAP3 1195 aaPredicted RBP6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 FAM89AQ96GI7 184 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 SAGE1Q9NXZ1 904 aa6.87□□□□□ -1.31
PMS2P3-206ENST00000438326 PODXL2Q9NZ53 605 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms