RNA–Protein interactions for RNA: ENST00000438326.2

PMS2P3-206, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-206ENST00000438326 NISCHQ9Y2I1 1504 aa13.51□□□□□ -0.25
PMS2P3-206ENST00000438326 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
PMS2P3-206ENST00000438326 ABCC9O60706 1549 aa12.13□□□□□ -0.47
PMS2P3-206ENST00000438326 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
PMS2P3-206ENST00000438326 NACADO15069 1562 aa11.54□□□□□ -0.56
PMS2P3-206ENST00000438326 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
PMS2P3-206ENST00000438326 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.59
PMS2P3-206ENST00000438326 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
PMS2P3-206ENST00000438326 BICRAQ9NZM4 1560 aa11.27□□□□□ -0.61
PMS2P3-206ENST00000438326 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
PMS2P3-206ENST00000438326 DCAF1Q9Y4B6 1507 aa11.22□□□□□ -0.61
PMS2P3-206ENST00000438326 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
PMS2P3-206ENST00000438326 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
PMS2P3-206ENST00000438326 PABPN1Q86U42 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
PMS2P3-206ENST00000438326 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
PMS2P3-206ENST00000438326 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
PMS2P3-206ENST00000438326 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
PMS2P3-206ENST00000438326 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
PMS2P3-206ENST00000438326 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
PMS2P3-206ENST00000438326 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
PMS2P3-206ENST00000438326 SMARCA4P51532 1647 aa10.58□□□□□ -0.72
PMS2P3-206ENST00000438326 SMARCA2P51531 1590 aa10.57□□□□□ -0.72
PMS2P3-206ENST00000438326 CUX2O14529 1486 aa10.55□□□□□ -0.72
PMS2P3-206ENST00000438326 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
PMS2P3-206ENST00000438326 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
PMS2P3-206ENST00000438326 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
PMS2P3-206ENST00000438326 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
PMS2P3-206ENST00000438326 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
PMS2P3-206ENST00000438326 BAZ1BQ9UIG0 1483 aaKnown RBP10.46□□□□□ -0.74
PMS2P3-206ENST00000438326 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
PMS2P3-206ENST00000438326 THOC2Q8NI27 1593 aaKnown RBP10.42□□□□□ -0.74
PMS2P3-206ENST00000438326 NESP48681 1621 aa10.41□□□□□ -0.74
PMS2P3-206ENST00000438326 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
PMS2P3-206ENST00000438326 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
PMS2P3-206ENST00000438326 PDS5BQ9NTI5 1447 aa10.31□□□□□ -0.76
PMS2P3-206ENST00000438326 WIZO95785 1651 aa10.28□□□□□ -0.76
PMS2P3-206ENST00000438326 WDR62O43379 1518 aa10.25□□□□□ -0.77
PMS2P3-206ENST00000438326 CADPSQ9ULU8 1353 aa10.25□□□□□ -0.77
PMS2P3-206ENST00000438326 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
PMS2P3-206ENST00000438326 PRDM2Q13029 1718 aa10.19□□□□□ -0.78
PMS2P3-206ENST00000438326 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
PMS2P3-206ENST00000438326 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
PMS2P3-206ENST00000438326 CFTRP13569 1480 aa10.16□□□□□ -0.78
PMS2P3-206ENST00000438326 FANCD2Q9BXW9 1451 aa10.15□□□□□ -0.78
PMS2P3-206ENST00000438326 RSF1Q96T23 1441 aaPredicted RBP10.14□□□□□ -0.79
PMS2P3-206ENST00000438326 CHIC1Q5VXU3 224 aa10.08□□□□□ -0.8
PMS2P3-206ENST00000438326 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
PMS2P3-206ENST00000438326 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
PMS2P3-206ENST00000438326 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
PMS2P3-206ENST00000438326 AEBP2Q6ZN18 517 aaPredicted RBP9.98□□□□□ -0.81
PMS2P3-206ENST00000438326 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
PMS2P3-206ENST00000438326 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
PMS2P3-206ENST00000438326 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
PMS2P3-206ENST00000438326 EIF4G3O43432 1585 aaKnown RBP9.96□□□□□ -0.82
PMS2P3-206ENST00000438326 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
PMS2P3-206ENST00000438326 TRIM41Q8WV44 630 aa9.95□□□□□ -0.82
PMS2P3-206ENST00000438326 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
PMS2P3-206ENST00000438326 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
PMS2P3-206ENST00000438326 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
PMS2P3-206ENST00000438326 ZNF608Q9ULD9 1512 aaPredicted RBP9.93□□□□□ -0.82
PMS2P3-206ENST00000438326 TARBP1Q13395 1621 aaKnown RBP9.92□□□□□ -0.82
PMS2P3-206ENST00000438326 CHD1O14646 1710 aa9.9□□□□□ -0.83
PMS2P3-206ENST00000438326 ARHGEF11O15085 1522 aa9.88□□□□□ -0.83
PMS2P3-206ENST00000438326 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
PMS2P3-206ENST00000438326 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
PMS2P3-206ENST00000438326 AQRO60306 1485 aaKnown RBP eCLIP9.81□□□□□ -0.841e-6■■■■■ 33.8
PMS2P3-206ENST00000438326 FGD5Q6ZNL6 1462 aa9.79□□□□□ -0.84
PMS2P3-206ENST00000438326 ARAP1Q96P48 1450 aa9.78□□□□□ -0.84
PMS2P3-206ENST00000438326 CUX1P39880 1505 aa9.77□□□□□ -0.84
PMS2P3-206ENST00000438326 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.84
PMS2P3-206ENST00000438326 MAGI1Q96QZ7 1491 aaPredicted RBP9.77□□□□□ -0.85
PMS2P3-206ENST00000438326 RAD54L2Q9Y4B4 1467 aa9.77□□□□□ -0.85
PMS2P3-206ENST00000438326 SOGA1O94964 1423 aa9.76□□□□□ -0.85
PMS2P3-206ENST00000438326 SNAPC4Q5SXM2 1469 aa9.76□□□□□ -0.85
PMS2P3-206ENST00000438326 PBRM1Q86U86 1689 aa9.76□□□□□ -0.85
PMS2P3-206ENST00000438326 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
PMS2P3-206ENST00000438326 GRIN2BQ13224 1484 aa9.73□□□□□ -0.85
PMS2P3-206ENST00000438326 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
PMS2P3-206ENST00000438326 ABCA5Q8WWZ7 1642 aa9.72□□□□□ -0.85
PMS2P3-206ENST00000438326 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
PMS2P3-206ENST00000438326 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
PMS2P3-206ENST00000438326 FBLN2P98095 1184 aa9.68□□□□□ -0.86
PMS2P3-206ENST00000438326 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
PMS2P3-206ENST00000438326 GAPVD1Q14C86 1478 aa9.67□□□□□ -0.86
PMS2P3-206ENST00000438326 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
PMS2P3-206ENST00000438326 ADAMTS12P58397 1594 aa9.65□□□□□ -0.86
PMS2P3-206ENST00000438326 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
PMS2P3-206ENST00000438326 CHMP7Q8WUX9 453 aaPredicted RBP9.64□□□□□ -0.87
PMS2P3-206ENST00000438326 GRIN2AQ12879 1464 aa9.61□□□□□ -0.87
PMS2P3-206ENST00000438326 SHROOM2Q13796 1616 aa9.61□□□□□ -0.87
PMS2P3-206ENST00000438326 WRNQ14191 1432 aaPredicted RBP eCLIP9.61□□□□□ -0.87
PMS2P3-206ENST00000438326 CEP170Q5SW79 1584 aa9.59□□□□□ -0.87
PMS2P3-206ENST00000438326 NUP160Q12769 1436 aa9.59□□□□□ -0.87
PMS2P3-206ENST00000438326 ERICH3Q5RHP9 1530 aa9.59□□□□□ -0.87
PMS2P3-206ENST00000438326 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
PMS2P3-206ENST00000438326 ERCC6L2Q5T890 1561 aa9.56□□□□□ -0.88
PMS2P3-206ENST00000438326 FHAD1B1AJZ9 1412 aa9.56□□□□□ -0.88
PMS2P3-206ENST00000438326 RUSC2Q8N2Y8 1516 aa9.52□□□□□ -0.88
PMS2P3-206ENST00000438326 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
PMS2P3-206ENST00000438326 KIF13AQ9H1H9 1805 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1624.5 ms