RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 CHMP3Q9Y3E7 222 aa7.09□□□□□ -1.27
NCL-204ENST00000436894 SHANK2Q9UPX8 1470 aa7.09□□□□□ -1.27
NCL-204ENST00000436894 KIAA1107Q9UPP5 1409 aa7.09□□□□□ -1.28
NCL-204ENST00000436894 TTLL8A6PVC2 850 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 ZBTB39O15060 712 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 AXIN1O15169 862 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 DGAT1O75907 488 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 HIRAP54198 1017 aaPredicted RBP7.08□□□□□ -1.28
NCL-204ENST00000436894 ARHGAP4P98171 946 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 GGT6Q6P531 493 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 A2MP01023 1474 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 ARHGAP35Q9NRY4 1499 aa7.08□□□□□ -1.28
NCL-204ENST00000436894 CLTCQ00610 1675 aaKnown RBP7.08□□□□□ -1.28
NCL-204ENST00000436894 SOS2Q07890 1332 aaPredicted RBP7.07□□□□□ -1.28
NCL-204ENST00000436894 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 SPATA31C2B4DYI2 1134 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 GTF2E1P29083 439 aaPredicted RBP7.07□□□□□ -1.28
NCL-204ENST00000436894 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
NCL-204ENST00000436894 DGKZQ13574 1117 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 SCARF1Q14162 830 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 NBPF10Q6P3W6 841 aaKnown RBP7.07□□□□□ -1.28
NCL-204ENST00000436894 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 AAASQ9NRG9 546 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 DNMT3LQ9UJW3 386 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 CASKIN1Q8WXD9 1431 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 PLXNC1O60486 1568 aa7.07□□□□□ -1.28
NCL-204ENST00000436894 ATP7AQ04656 1500 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 DNMT1P26358 1616 aaKnown RBP7.06□□□□□ -1.28
NCL-204ENST00000436894 HNRNPMP52272 730 aaKnown RBP eCLIP7.06□□□□□ -1.28
NCL-204ENST00000436894 SF3B2Q13435 895 aaKnown RBP7.06□□□□□ -1.28
NCL-204ENST00000436894 CTC1Q2NKJ3 1217 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 DNAJC14Q6Y2X3 702 aaPredicted RBP7.06□□□□□ -1.28
NCL-204ENST00000436894 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 ETFBKMTQ8IXQ9 262 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 C7orf43Q8WVR3 580 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 MYO19Q96H55 970 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 CFDP1Q9UEE9 299 aaPredicted RBP7.06□□□□□ -1.28
NCL-204ENST00000436894 BCS1LQ9Y276 419 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 CDC42BPAQ5VT25 1732 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 FAM135AQ9P2D6 1515 aa7.06□□□□□ -1.28
NCL-204ENST00000436894 POLR1AO95602 1720 aaPredicted RBP7.05□□□□□ -1.28
NCL-204ENST00000436894 ATP4AP20648 1035 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 MARSP56192 900 aaKnown RBP7.05□□□□□ -1.28
NCL-204ENST00000436894 RTN1Q16799 776 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 CRIPAKQ8N1N5 446 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 ATP13A2Q9NQ11 1180 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 STIM2Q9P246 746 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 ADGBQ8N7X0 1667 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 TNRQ92752 1358 aa7.05□□□□□ -1.28
NCL-204ENST00000436894 MED14O60244 1454 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 NLRP1Q9C000 1473 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 RTEL1-TNFRSF6BF6WH68 1400 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 NPR3P17342 541 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 EIF1AXP47813 144 aaKnown RBP7.04□□□□□ -1.28
NCL-204ENST00000436894 ZNF280CQ8ND82 737 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 HSH2DQ96JZ2 352 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.284e-8■■■□□ 16.1
NCL-204ENST00000436894 CCDC87Q9NVE4 849 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 SYCP2Q9BX26 1530 aa7.04□□□□□ -1.28
NCL-204ENST00000436894 GPATCH8Q9UKJ3 1502 aaKnown RBP7.04□□□□□ -1.28
NCL-204ENST00000436894 INO80Q9ULG1 1556 aaPredicted RBP7.03□□□□□ -1.28
NCL-204ENST00000436894 DEPDC5O75140 1603 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 IFT43Q96FT9 208 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 GPAMQ9HCL2 828 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 TIMMDC1Q9NPL8 285 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 LRRIQ1Q96JM4 1722 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 DHX29Q7Z478 1369 aaKnown RBP7.03□□□□□ -1.28
NCL-204ENST00000436894 CCNB3Q8WWL7 1395 aa7.03□□□□□ -1.28
NCL-204ENST00000436894 WASHC2CQ9Y4E1 1318 aa7.02□□□□□ -1.28
NCL-204ENST00000436894 NPHP4O75161 1426 aaPredicted RBP7.02□□□□□ -1.29
NCL-204ENST00000436894 MIA2Q96PC5 1412 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 FZD6O60353 706 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 FAM13AO94988 1023 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 MSX1P28360 303 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 MAPK1P28482 360 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 NBPF1Q3BBV0 1214 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 C11orf91Q3C1V1 193 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 C1orf53Q5VUE5 145 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 PZPP20742 1482 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 FYCO1Q9BQS8 1478 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 VWDEQ8N2E2 1590 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 NEURL4Q96JN8 1562 aa7.02□□□□□ -1.29
NCL-204ENST00000436894 UGGT1Q9NYU2 1555 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.01□□□□□ -1.29
NCL-204ENST00000436894 BRD2P25440 801 aaKnown RBP7.01□□□□□ -1.29
NCL-204ENST00000436894 AAMPQ13685 434 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 BICDL1Q6ZP65 573 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 SUSD3Q96L08 255 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 ZIC5Q96T25 663 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 RUBCNLQ9H714 662 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 ZDHHC3Q9NYG2 299 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 DCTN4Q9UJW0 460 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 USP20Q9Y2K6 914 aa7.01□□□□□ -1.29
NCL-204ENST00000436894 SYNMO15061 1565 aa7□□□□□ -1.29
NCL-204ENST00000436894 ANKRD33BA6NCL7 494 aa7□□□□□ -1.29
NCL-204ENST00000436894 KIF3BO15066 747 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms