RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SLC6A14Q9UN76 642 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 RNF225M0QZC1 329 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P13-201ENST00000406019 CMTR1Q8N1G2 835 aaKnown RBP8.74□□□□□ -1.01
HMGB1P13-201ENST00000406019 TRPM4Q8TD43 1214 aa8.74□□□□□ -1.01
HMGB1P13-201ENST00000406019 COL8A1P27658 744 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 KANK3Q6NY19 840 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 ILDR2Q71H61 639 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 TRIM11Q96F44 468 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 SUV39H2Q9H5I1 410 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 MKL2Q9ULH7 1088 aa8.73□□□□□ -1.01
HMGB1P13-201ENST00000406019 AMPD1P23109 780 aa8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 EIF1AXP47813 144 aaKnown RBP8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 MICALL1Q8N3F8 863 aa8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 KCTD17Q8N5Z5 321 aa8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 TLR7Q9NYK1 1049 aaKnown RBP8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 EGFL7Q9UHF1 273 aa8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
HMGB1P13-201ENST00000406019 PHF20L1A8MW92 1017 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 ITGB2P05107 769 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 RARAP10276 462 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 SERPINB4P48594 390 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 GPLD1P80108 840 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 ZNF211Q13398 564 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 B4GALNT3Q6L9W6 998 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 C8orf86Q6ZUL3 223 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 PNMA5Q96PV4 448 aa8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 UBE2OQ9C0C9 1292 aaKnown RBP8.71□□□□□ -1.02
HMGB1P13-201ENST00000406019 M0R082 166 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 GNB5O14775 395 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 FZD6O60353 706 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 MMP20O60882 483 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 NID1P14543 1247 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 RANGAP1P46060 587 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 NRLP54845 237 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 PODNQ7Z5L7 613 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 ZNF417Q8TAU3 575 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 ZNF587Q96SQ5 575 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 RRAGCQ9HB90 399 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 FAM13BQ9NYF5 915 aa8.7□□□□□ -1.02
HMGB1P13-201ENST00000406019 UBAP1LF5GYI3 381 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 ICMTO60725 284 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 PDGFAP04085 211 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 ALAS2P22557 587 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 ARID4AP29374 1257 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 SOX18P35713 384 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 NUDT16Q96DE0 195 aaKnown RBP8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 ANO2Q9NQ90 1003 aa8.69□□□□□ -1.02
HMGB1P13-201ENST00000406019 PLAURQ03405 335 aa8.68□□□□□ -1.02
HMGB1P13-201ENST00000406019 GRIK5Q16478 980 aa8.68□□□□□ -1.02
HMGB1P13-201ENST00000406019 EDEM1Q92611 657 aa8.68□□□□□ -1.02
HMGB1P13-201ENST00000406019 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
HMGB1P13-201ENST00000406019 GGNBP2Q9H3C7 697 aa8.68□□□□□ -1.02
HMGB1P13-201ENST00000406019 GDF11O95390 407 aa8.67□□□□□ -1.02
HMGB1P13-201ENST00000406019 MZF1P28698 734 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P13-201ENST00000406019 XKR5Q6UX68 686 aa8.67□□□□□ -1.02
HMGB1P13-201ENST00000406019 TMEM151AQ8N4L1 468 aa8.67□□□□□ -1.02
HMGB1P13-201ENST00000406019 OR13H1Q8NG92 308 aa8.67□□□□□ -1.02
HMGB1P13-201ENST00000406019 MTMR7Q9Y216 660 aa8.67□□□□□ -1.02
HMGB1P13-201ENST00000406019 FAM13AO94988 1023 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 ARHGAP4P98171 946 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 MLLT1Q03111 559 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 PDE4CQ08493 712 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 TBC1D8BQ0IIM8 1120 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 COL13A1Q5TAT6 717 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 PDE12Q6L8Q7 609 aaKnown RBP8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 IGFLR1Q9H665 355 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 FRRS1LQ9P0K9 344 aa8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 GNEQ9Y223 722 aaKnown RBP8.66□□□□□ -1.02
HMGB1P13-201ENST00000406019 KRBA1A5PL33 1030 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 ABL1P00519 1130 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 ALKBH2Q6NS38 261 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 GJD3Q8N144 294 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 TTC9Q92623 222 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 POLIQ9UNA4 740 aa8.65□□□□□ -1.02
HMGB1P13-201ENST00000406019 A6NHS1 94 aa8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 BRD1O95696 1058 aa8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 PCSK7Q16549 785 aa8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 ELP3Q9H9T3 547 aa8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 CCDC87Q9NVE4 849 aa8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 FNDC3AQ9Y2H6 1198 aaKnown RBP8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P13-201ENST00000406019 H3BRB1 525 aa8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 KIF4AO95239 1232 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms