RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 KCTD17Q8N5Z5 321 aa5.51□□□□□ -1.53
SMC6-202ENST00000381272 C11orf16Q9NQ32 467 aa5.51□□□□□ -1.53
SMC6-202ENST00000381272 TOP2BQ02880 1626 aa5.5□□□□□ -1.53
SMC6-202ENST00000381272 ATP2B4P23634 1241 aa5.5□□□□□ -1.53
SMC6-202ENST00000381272 BRD2P25440 801 aaKnown RBP5.5□□□□□ -1.53
SMC6-202ENST00000381272 ADH7P40394 386 aa5.5□□□□□ -1.53
SMC6-202ENST00000381272 ALYREFQ86V81 257 aaKnown RBP5.5□□□□□ -1.53
SMC6-202ENST00000381272 TREML1Q86YW5 311 aa5.5□□□□□ -1.53
SMC6-202ENST00000381272 DCAF5Q96JK2 942 aa5.5□□□□□ -1.53
SMC6-202ENST00000381272 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.5□□□□□ -1.53
SMC6-202ENST00000381272 CAPN12Q6ZSI9 719 aa5.49□□□□□ -1.53
SMC6-202ENST00000381272 SAP130Q9H0E3 1048 aa5.49□□□□□ -1.53
SMC6-202ENST00000381272 IGFLR1Q9H665 355 aa5.49□□□□□ -1.53
SMC6-202ENST00000381272 VPS8Q8N3P4 1428 aa5.49□□□□□ -1.53
SMC6-202ENST00000381272 BIVM-ERCC5R4GMW8 1640 aa5.49□□□□□ -1.53
SMC6-202ENST00000381272 OPLAHO14841 1288 aa5.48□□□□□ -1.53
SMC6-202ENST00000381272 NFKB1P19838 968 aa5.48□□□□□ -1.53
SMC6-202ENST00000381272 GRNP28799 593 aaKnown RBP5.48□□□□□ -1.53
SMC6-202ENST00000381272 TBC1D8BQ0IIM8 1120 aa5.48□□□□□ -1.53
SMC6-202ENST00000381272 NAA30Q147X3 362 aaPredicted RBP5.48□□□□□ -1.53
SMC6-202ENST00000381272 UBE2OQ9C0C9 1292 aaKnown RBP5.48□□□□□ -1.53
SMC6-202ENST00000381272 NOP53Q9NZM5 478 aaKnown RBP5.48□□□□□ -1.53
SMC6-202ENST00000381272 SLAIN2Q9P270 581 aa5.48□□□□□ -1.53
SMC6-202ENST00000381272 RTCBQ9Y3I0 505 aaKnown RBP5.48□□□□□ -1.53
SMC6-202ENST00000381272 RGL4Q8IZJ4 473 aa5.48□□□□□ -1.53
SMC6-202ENST00000381272 M0R082 166 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 COL8A1P27658 744 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 PCSK7Q16549 785 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 ETFBKMTQ8IXQ9 262 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 CMTR1Q8N1G2 835 aaKnown RBP5.47□□□□□ -1.53
SMC6-202ENST00000381272 ZNF417Q8TAU3 575 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 ZNF587Q96SQ5 575 aaPredicted RBP5.47□□□□□ -1.53
SMC6-202ENST00000381272 SUV39H2Q9H5I1 410 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 STARD13Q9Y3M8 1113 aa5.47□□□□□ -1.53
SMC6-202ENST00000381272 TMEM88BA6NKF7 163 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 MAP3K6O95382 1288 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 KRT25Q7Z3Z0 450 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 MICALL1Q8N3F8 863 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 PRDM6Q9NQX0 595 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 DNAJB12Q9NXW2 375 aaKnown RBP5.46□□□□□ -1.53
SMC6-202ENST00000381272 FAM13BQ9NYF5 915 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 STIM2Q9P246 746 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 SLC6A14Q9UN76 642 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 USP20Q9Y2K6 914 aa5.46□□□□□ -1.53
SMC6-202ENST00000381272 CUX1P39880 1505 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 TNFRSF10BO14763 440 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 XYLBO75191 536 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 SASH3O75995 380 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 EGFRP00533 1210 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 IGHA1P01876 353 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 ALBP02768 609 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 RARAP10276 462 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 TARSP26639 723 aaKnown RBP5.46□□□□□ -1.54
SMC6-202ENST00000381272 ARID4AP29374 1257 aaPredicted RBP5.46□□□□□ -1.54
SMC6-202ENST00000381272 GPAT2Q6NUI2 795 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 ZFATQ9P243 1243 aa5.46□□□□□ -1.54
SMC6-202ENST00000381272 NCAPD3P42695 1498 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 SPDYE3A6NKU9 549 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 PLA2G4EQ3MJ16 856 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 DHX32Q7L7V1 743 aaKnown RBP5.45□□□□□ -1.54
SMC6-202ENST00000381272 PIK3R5Q8WYR1 880 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 TRIM11Q96F44 468 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 PLVAPQ9BX97 442 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 SEPT3Q9UH03 358 aa5.45□□□□□ -1.54
SMC6-202ENST00000381272 HMGXB3Q12766 1538 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 LILRB5O75023 590 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 SSFA2P28290 1259 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 ZAP70P43403 619 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 FAM26DQ5JW98 314 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 C20orf204Q6ZNR8 217 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 ABTB2Q8N961 1025 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 ARAP1Q96P48 1450 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 PRXQ9BXM0 1461 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 KRBA1A5PL33 1030 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 C8orf86Q6ZUL3 223 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 FAM35AQ86V20 835 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 ARID3AQ99856 593 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 KCNMB2Q9Y691 235 aa5.44□□□□□ -1.54
SMC6-202ENST00000381272 ERICH3Q5RHP9 1530 aa5.43□□□□□ -1.54
SMC6-202ENST00000381272 CENPBP07199 599 aaPredicted RBP5.43□□□□□ -1.54
SMC6-202ENST00000381272 SUZ12Q15022 739 aaKnown RBP5.43□□□□□ -1.54
SMC6-202ENST00000381272 PSAPL1Q6NUJ1 521 aa5.43□□□□□ -1.54
SMC6-202ENST00000381272 TRPM4Q8TD43 1214 aa5.43□□□□□ -1.54
SMC6-202ENST00000381272 JPH1Q9HDC5 661 aaPredicted RBP5.43□□□□□ -1.54
SMC6-202ENST00000381272 NAGPAQ9UK23 515 aa5.43□□□□□ -1.54
SMC6-202ENST00000381272 FNDC3AQ9Y2H6 1198 aaKnown RBP5.43□□□□□ -1.54
SMC6-202ENST00000381272 MSTNO14793 375 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 ZBTB39O15060 712 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 RGS9O75916 674 aaPredicted RBP5.42□□□□□ -1.54
SMC6-202ENST00000381272 NRLP54845 237 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 GPLD1P80108 840 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 COL9A3Q14050 684 aaPredicted RBP5.42□□□□□ -1.54
SMC6-202ENST00000381272 PRRT3Q5FWE3 981 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 HELQQ8TDG4 1101 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 NUDT8Q8WV74 236 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
SMC6-202ENST00000381272 TLR7Q9NYK1 1049 aaKnown RBP5.42□□□□□ -1.54
SMC6-202ENST00000381272 MTMR7Q9Y216 660 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 USTQ9Y2C2 406 aa5.42□□□□□ -1.54
SMC6-202ENST00000381272 KIF27Q86VH2 1401 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms