RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 SPATA31A5Q5VU36 1347 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 NPHP3Q7Z494 1330 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 SPATA31A7Q8IWB4 1347 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
C11orf54-202ENST00000354421 ZNF500O60304 480 aaPredicted RBP9.22□□□□□ -0.93
C11orf54-202ENST00000354421 RIPK4P57078 832 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 RABEP1Q15276 862 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 ANKRD45Q5TZF3 282 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 DDX49Q9Y6V7 483 aaKnown RBP9.22□□□□□ -0.93
C11orf54-202ENST00000354421 CFAP65Q6ZU64 1925 aaKnown RBP9.22□□□□□ -0.93
C11orf54-202ENST00000354421 ZNF697Q5TEC3 545 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 EMID1Q96A84 441 aaPredicted RBP9.22□□□□□ -0.93
C11orf54-202ENST00000354421 PDLIM2Q96JY6 352 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 TMEM134Q9H6X4 195 aa9.22□□□□□ -0.93
C11orf54-202ENST00000354421 CWC22Q9HCG8 908 aaKnown RBP9.22□□□□□ -0.93
C11orf54-202ENST00000354421 ZFYVE9O95405 1425 aa9.21□□□□□ -0.93
C11orf54-202ENST00000354421 A0A1W2PP64 1363 aa9.21□□□□□ -0.93
C11orf54-202ENST00000354421 ABCC4O15439 1325 aa9.21□□□□□ -0.93
C11orf54-202ENST00000354421 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.94
C11orf54-202ENST00000354421 POLD1P28340 1107 aa9.21□□□□□ -0.94
C11orf54-202ENST00000354421 MCM5P33992 734 aa9.21□□□□□ -0.94
C11orf54-202ENST00000354421 TMEM132EQ6IEE7 984 aa9.21□□□□□ -0.94
C11orf54-202ENST00000354421 LMBRD1Q9NUN5 540 aa9.21□□□□□ -0.94
C11orf54-202ENST00000354421 NOL7Q9UMY1 257 aaKnown RBP9.21□□□□□ -0.94
C11orf54-202ENST00000354421 PXDNQ92626 1479 aa9.21□□□□□ -0.94
C11orf54-202ENST00000354421 RGPD3A6NKT7 1758 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-202ENST00000354421 RGPD4Q7Z3J3 1758 aa9.21□□□□□ -0.94
C11orf54-202ENST00000354421 TLL1O43897 1013 aa9.2□□□□□ -0.94
C11orf54-202ENST00000354421 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
C11orf54-202ENST00000354421 FCHSD2O94868 740 aa9.2□□□□□ -0.94
C11orf54-202ENST00000354421 CALD1Q05682 793 aaKnown RBP9.2□□□□□ -0.94
C11orf54-202ENST00000354421 SIRT2Q8IXJ6 389 aa9.2□□□□□ -0.94
C11orf54-202ENST00000354421 ADAMTS13Q76LX8 1427 aa9.2□□□□□ -0.94
C11orf54-202ENST00000354421 VAMP4O75379 141 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 NR1I2O75469 434 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 ADH1BP00325 375 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
C11orf54-202ENST00000354421 ZSCAN23Q3MJ62 389 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 S1PR4O95977 384 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 RBSNQ9H1K0 784 aa9.19□□□□□ -0.94
C11orf54-202ENST00000354421 CD163L1Q9NR16 1453 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 FYB1O15117 783 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 GDF9O60383 454 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 MCTP1Q6DN14 999 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
C11orf54-202ENST00000354421 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 GGNBP2Q9H3C7 697 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 TERF2IPQ9NYB0 399 aa9.18□□□□□ -0.94
C11orf54-202ENST00000354421 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 CFHP08603 1231 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 ZNF853P0CG23 659 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
C11orf54-202ENST00000354421 PTGDRQ13258 359 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 MTERF4Q7Z6M4 381 aaKnown RBP9.17□□□□□ -0.94
C11orf54-202ENST00000354421 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
C11orf54-202ENST00000354421 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 CAVIN1Q6NZI2 390 aaKnown RBP9.17□□□□□ -0.94
C11orf54-202ENST00000354421 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
C11orf54-202ENST00000354421 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 IFT57Q9NWB7 429 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 ZKSCAN5Q9Y2L8 839 aa9.17□□□□□ -0.94
C11orf54-202ENST00000354421 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
C11orf54-202ENST00000354421 DYNC1I1O14576 645 aa9.16□□□□□ -0.94
C11orf54-202ENST00000354421 PPEF1O14829 653 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-202ENST00000354421 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
C11orf54-202ENST00000354421 GNAI1P63096 354 aa9.16□□□□□ -0.94
C11orf54-202ENST00000354421 XPCQ01831 940 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-202ENST00000354421 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
C11orf54-202ENST00000354421 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
C11orf54-202ENST00000354421 BTG4Q9NY30 223 aa9.16□□□□□ -0.94
C11orf54-202ENST00000354421 CCDC39Q9UFE4 941 aa9.16□□□□□ -0.94
C11orf54-202ENST00000354421 KNDC1Q76NI1 1749 aa9.15□□□□□ -0.94
C11orf54-202ENST00000354421 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.94
C11orf54-202ENST00000354421 LRSAM1Q6UWE0 723 aa9.15□□□□□ -0.94
C11orf54-202ENST00000354421 C1orf115Q9H7X2 142 aa9.15□□□□□ -0.94
C11orf54-202ENST00000354421 R3HCC1Q9Y3T6 440 aaKnown RBP9.15□□□□□ -0.94
C11orf54-202ENST00000354421 NRAPQ86VF7 1730 aa9.15□□□□□ -0.95
C11orf54-202ENST00000354421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.14□□□□□ -0.95
C11orf54-202ENST00000354421 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
C11orf54-202ENST00000354421 PRKAR2BP31323 418 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 GPT2Q8TD30 523 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 ZDHHC9Q9Y397 364 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 SPATA31A3Q5VYP0 1347 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 CACNA1AO00555 2505 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 A0A0C4DFX4 3053 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 MBD3O95983 291 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 SASS6Q6UVJ0 657 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
C11orf54-202ENST00000354421 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms