RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 ATRNO75882 1429 aa17.71■□□□□ 0.43
HOXA3-201ENST00000317201 CDC45O75419 566 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 APPP05067 770 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 TCIRG1Q13488 830 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 MPNDQ8N594 471 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 A0A087WZG4 1122 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 APBB1O00213 710 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
HOXA3-201ENST00000317201 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
HOXA3-201ENST00000317201 TNPO1Q92973 898 aaKnown RBP17.7■□□□□ 0.42
HOXA3-201ENST00000317201 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 MAP3K15Q6ZN16 1313 aa17.7■□□□□ 0.42
HOXA3-201ENST00000317201 ONECUT3O60422 494 aaPredicted RBP17.69■□□□□ 0.42
HOXA3-201ENST00000317201 MX1P20591 662 aa17.69■□□□□ 0.42
HOXA3-201ENST00000317201 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
HOXA3-201ENST00000317201 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
HOXA3-201ENST00000317201 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 GJD4Q96KN9 370 aaPredicted RBP17.68■□□□□ 0.42
HOXA3-201ENST00000317201 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
HOXA3-201ENST00000317201 ATP5J2-PTCD1G3V325 749 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 NHSQ6T4R5 1651 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 SIK1P57059 783 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
HOXA3-201ENST00000317201 MYRIPQ8NFW9 859 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 ZBTB3Q9H5J0 574 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
HOXA3-201ENST00000317201 PRR29P0C7W0 189 aa17.67■□□□□ 0.42
HOXA3-201ENST00000317201 UBE3BQ7Z3V4 1068 aa17.67■□□□□ 0.42
HOXA3-201ENST00000317201 ACSBG1Q96GR2 724 aa17.67■□□□□ 0.42
HOXA3-201ENST00000317201 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
HOXA3-201ENST00000317201 AFF2P51816 1311 aa17.67■□□□□ 0.42
HOXA3-201ENST00000317201 TRPC5Q9UL62 973 aaPredicted RBP17.67■□□□□ 0.42
HOXA3-201ENST00000317201 COL5A3P25940 1745 aaPredicted RBP17.67■□□□□ 0.42
HOXA3-201ENST00000317201 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
HOXA3-201ENST00000317201 CAPN2P17655 700 aa17.66■□□□□ 0.42
HOXA3-201ENST00000317201 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
HOXA3-201ENST00000317201 CCDC87Q9NVE4 849 aa17.66■□□□□ 0.42
HOXA3-201ENST00000317201 ZBTB1Q9Y2K1 713 aa17.66■□□□□ 0.42
HOXA3-201ENST00000317201 SDSP20132 328 aa17.65■□□□□ 0.42
HOXA3-201ENST00000317201 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
HOXA3-201ENST00000317201 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
HOXA3-201ENST00000317201 RFX5P48382 616 aaPredicted RBP17.65■□□□□ 0.42
HOXA3-201ENST00000317201 EIF5P55010 431 aaKnown RBP17.65■□□□□ 0.42
HOXA3-201ENST00000317201 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
HOXA3-201ENST00000317201 PDCL2Q8N4E4 241 aa17.65■□□□□ 0.42
HOXA3-201ENST00000317201 FOXO4P98177 505 aa17.64■□□□□ 0.41
HOXA3-201ENST00000317201 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
HOXA3-201ENST00000317201 INTS5Q6P9B9 1019 aaKnown RBP17.64■□□□□ 0.41
HOXA3-201ENST00000317201 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
HOXA3-201ENST00000317201 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.41
HOXA3-201ENST00000317201 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
HOXA3-201ENST00000317201 PLA2G12BQ9BX93 195 aa17.64■□□□□ 0.41
HOXA3-201ENST00000317201 EP400NLQ6ZTU2 488 aa17.64■□□□□ 0.41
HOXA3-201ENST00000317201 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
HOXA3-201ENST00000317201 C22orf23Q9BZE7 217 aa17.63■□□□□ 0.41
HOXA3-201ENST00000317201 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
HOXA3-201ENST00000317201 ERICH4A6NGS2 130 aa17.63■□□□□ 0.41
HOXA3-201ENST00000317201 RBM25P49756 843 aaKnown RBP17.63■□□□□ 0.41
HOXA3-201ENST00000317201 IL1RAPL2Q9NP60 686 aa17.63■□□□□ 0.41
HOXA3-201ENST00000317201 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
HOXA3-201ENST00000317201 RGL2O15211 777 aa17.62■□□□□ 0.41
HOXA3-201ENST00000317201 KCNQ2O43526 872 aa17.62■□□□□ 0.41
HOXA3-201ENST00000317201 CRKLP46109 303 aaKnown RBP17.62■□□□□ 0.41
HOXA3-201ENST00000317201 MFAP1P55081 439 aaKnown RBP17.62■□□□□ 0.41
HOXA3-201ENST00000317201 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
HOXA3-201ENST00000317201 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
HOXA3-201ENST00000317201 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
HOXA3-201ENST00000317201 NUP98P52948 1817 aa17.61■□□□□ 0.41
HOXA3-201ENST00000317201 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
HOXA3-201ENST00000317201 ITPK1Q13572 414 aa17.61■□□□□ 0.41
HOXA3-201ENST00000317201 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
HOXA3-201ENST00000317201 DDX49Q9Y6V7 483 aaKnown RBP17.61■□□□□ 0.41
HOXA3-201ENST00000317201 SASH1O94885 1247 aa17.61■□□□□ 0.41
HOXA3-201ENST00000317201 DZIP3Q86Y13 1208 aaKnown RBP17.61■□□□□ 0.41
HOXA3-201ENST00000317201 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
HOXA3-201ENST00000317201 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
HOXA3-201ENST00000317201 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 ZNF330Q9Y3S2 320 aaPredicted RBP17.6■□□□□ 0.41
HOXA3-201ENST00000317201 BTAF1O14981 1849 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
HOXA3-201ENST00000317201 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 TIGD1Q96MW7 591 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 GBP4Q96PP9 640 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
HOXA3-201ENST00000317201 ERC2O15083 957 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 HS1BP3Q53T59 392 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 NLRP10Q86W26 655 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 C17orf53Q8N3J3 647 aaPredicted RBP17.59■□□□□ 0.41
HOXA3-201ENST00000317201 CNTNAP4Q9C0A0 1308 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 A0A0G2JS52 829 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 HLFQ16534 295 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 NUTM1Q86Y26 1132 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
HOXA3-201ENST00000317201 GLRX3O76003 335 aaKnown RBP17.58■□□□□ 0.41
HOXA3-201ENST00000317201 PSEN1P49768 467 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms