RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 AGGF1Q8N302 714 aaeCLIP15.23■□□□□ 0.034e-16■□□□□ 8.5
HOXA3-201ENST00000317201 HNRNPLP14866 589 aaKnown RBP eCLIP14.2□□□□□ -0.141e-13■■■■■ 30.1
HOXA3-201ENST00000317201 SF3A3Q12874 501 aaKnown RBP eCLIP15.95■□□□□ 0.149e-11■■□□□ 14.1
HOXA3-201ENST00000317201 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.061e-10■■■■□ 23.9
HOXA3-201ENST00000317201 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.73e-10■■■□□ 17.9
HOXA3-201ENST00000317201 NKRFO15226 690 aaKnown RBP eCLIP15.76■□□□□ 0.115e-10■□□□□ 10.8
HOXA3-201ENST00000317201 GTF2F1P35269 517 aaKnown RBP eCLIP17.45■□□□□ 0.386e-10■■□□□ 13.4
HOXA3-201ENST00000317201 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.432e-9■□□□□ 10.6
HOXA3-201ENST00000317201 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.51■□□□□ 0.079e-9■■■■■ 36.7
HOXA3-201ENST00000317201 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.21□□□□□ -0.131e-8■■■■□ 19.7
HOXA3-201ENST00000317201 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.74■□□□□ 0.118e-8■■■□□ 18.8
HOXA3-201ENST00000317201 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.19e-8■□□□□ 10
HOXA3-201ENST00000317201 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.02■□□□□ -07e-7■■□□□ 12.1
HOXA3-201ENST00000317201 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■■□ 20.5
HOXA3-201ENST00000317201 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■□□□□ 11.3
HOXA3-201ENST00000317201 PCBP2Q15366 365 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■■■■□ 23.5
HOXA3-201ENST00000317201 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.013e-6■■■■□ 23.5
HOXA3-201ENST00000317201 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.028e-6■□□□□ 10.8
Retrieved 18 of 18 RNA–protein pairs in 16.9 ms