RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 LMBR1LQ6UX01 489 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 CHMP4BP1P59074 171 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 DRC7Q8IY82 874 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 MPHOSPH8Q99549 860 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 APPP05067 770 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 FOXD4L4Q8WXT5 416 aaPredicted RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 SUCLG2Q96I99 432 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 AK7Q96M32 723 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 ZFYP08048 801 aaPredicted RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 RAB3GAP1Q15042 981 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 TPD52L1Q16890 204 aaPredicted RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 METTL24Q5JXM2 366 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 GNL3LQ9NVN8 582 aaKnown RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 NEBLO76041 1014 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 MSNP26038 577 aaKnown RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 DDB1Q16531 1140 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 UPF3BQ9BZI7 483 aaKnown RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 PA2G4Q9UQ80 394 aaKnown RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 HEG1Q9ULI3 1381 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 CPLX1O14810 134 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 SGSM2O43147 1006 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 ZBTB24O43167 697 aaPredicted RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 NF2P35240 595 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 ZFYVE27Q5T4F4 411 aa8.17□□□□□ -1.1
VPS8-201ENST00000287546 TRMT112Q9UI30 125 aaKnown RBP8.17□□□□□ -1.1
VPS8-201ENST00000287546 IGHMBP2P38935 993 aaKnown RBP8.16□□□□□ -1.1
VPS8-201ENST00000287546 TTF1Q15361 905 aaPredicted RBP8.16□□□□□ -1.1
VPS8-201ENST00000287546 TMX3Q96JJ7 454 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 SCLT1Q96NL6 688 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 ERICH2A1L162 156 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 SART3Q15020 963 aaKnown RBP8.16□□□□□ -1.1
VPS8-201ENST00000287546 TICAM2Q86XR7 235 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 ZSCAN29Q8IWY8 852 aaPredicted RBP8.16□□□□□ -1.1
VPS8-201ENST00000287546 COPRSQ9NQ92 184 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 SLIT3O75094 1523 aa8.16□□□□□ -1.1
VPS8-201ENST00000287546 RTN4Q9NQC3 1192 aaKnown RBP8.15□□□□□ -1.1
VPS8-201ENST00000287546 USP16Q9Y5T5 823 aa8.15□□□□□ -1.1
VPS8-201ENST00000287546 NFAT5O94916 1531 aa8.15□□□□□ -1.1
VPS8-201ENST00000287546 GLIPR1L2Q4G1C9 344 aa8.15□□□□□ -1.1
VPS8-201ENST00000287546 PRPF40AO75400 957 aaKnown RBP8.15□□□□□ -1.1
VPS8-201ENST00000287546 FKBP4Q02790 459 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS8-201ENST00000287546 CYP27B1O15528 508 aa8.15□□□□□ -1.11
VPS8-201ENST00000287546 UQCRFS1P1P0C7P4 283 aa8.15□□□□□ -1.11
VPS8-201ENST00000287546 SF3A1Q15459 793 aaKnown RBP8.15□□□□□ -1.11
VPS8-201ENST00000287546 IMMTQ16891 758 aaKnown RBP8.15□□□□□ -1.11
VPS8-201ENST00000287546 LTN1O94822 1766 aa8.15□□□□□ -1.11
VPS8-201ENST00000287546 EYA2O00167 538 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 BAG4O95429 457 aaKnown RBP8.14□□□□□ -1.11
VPS8-201ENST00000287546 SSFA2P28290 1259 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 PROSER3Q2NL68 480 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 TNNI3KQ59H18 835 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 NACAP1Q9BZK3 213 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 FPGT-TNNI3KV9GXZ4 949 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 LTBP4Q8N2S1 1624 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 CCDC171Q6TFL3 1326 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 SLC5A1P13866 664 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 HSPA4P34932 840 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 KRT85P78386 507 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 MCMDC2Q4G0Z9 681 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 LDHAL6AQ6ZMR3 332 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 TRIM29Q14134 588 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 KLHL40Q2TBA0 621 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 RBM8AQ9Y5S9 174 aaKnown RBP8.14□□□□□ -1.11
VPS8-201ENST00000287546 ADCY9O60503 1353 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 FAM177BA6PVY3 158 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 ATP5JP18859 108 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 LARP1BQ659C4 914 aaKnown RBP8.14□□□□□ -1.11
VPS8-201ENST00000287546 CAVIN1Q6NZI2 390 aaKnown RBP8.14□□□□□ -1.11
VPS8-201ENST00000287546 TM6SF1Q9BZW5 370 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 GPR108Q9NPR9 543 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 RGS12O14924 1447 aa8.14□□□□□ -1.11
VPS8-201ENST00000287546 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 DESP17661 470 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 TCIRG1Q13488 830 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 ATG3Q9NT62 314 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 ABCC6O95255 1503 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 TFCP2Q12800 502 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 AIDAQ96BJ3 306 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 TNNT3P45378 269 aaPredicted RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 HMGN5P82970 282 aaKnown RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 PARP10Q53GL7 1025 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 CDC5LQ99459 802 aaKnown RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 RGPD1P0DJD0 1748 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 GOLIM4O00461 696 aa8.13□□□□□ -1.11
VPS8-201ENST00000287546 NASPP49321 788 aaPredicted RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 NMIQ13287 307 aaPredicted RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
VPS8-201ENST00000287546 A1BGP04217 495 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 ATP2B2Q01814 1243 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 ZNF396Q96N95 335 aaPredicted RBP8.12□□□□□ -1.11
VPS8-201ENST00000287546 HELLSQ9NRZ9 838 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 PAG1Q9NWQ8 432 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 UQCRHP07919 91 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 PIP4K2AP48426 406 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms