RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ppp4r3aQ6P2K6 820 aa16.09■□□□□ 0.17
Rnf4-204ENSMUST00000182047 Rbbp8nlA2ABX0 614 aa16.08■□□□□ 0.17
Rnf4-204ENSMUST00000182047 Cops6O88545 324 aa16.08■□□□□ 0.17
Rnf4-204ENSMUST00000182047 Ddx46Q569Z5 1032 aaKnown RBP16.08■□□□□ 0.17
Rnf4-204ENSMUST00000182047 Nlrp1aQ2LKU9 1182 aa16.08■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Nol10Q5RJG1 687 aaKnown RBP16.08■□□□□ 0.16
Rnf4-204ENSMUST00000182047 NfkbibQ60778 359 aa16.08■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Trip6Q9Z1Y4 480 aa16.08■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Slf2Q6P9P0 1278 aa16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 LlphQ9D945 130 aaKnown RBP16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Kndc1Q0KK55 1742 aa16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 EvcP57680 1005 aa16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Esco1Q69Z69 843 aa16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Slx4ipQ9D7Y9 413 aa16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Sytl4Q9R0Q1 673 aa16.07■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ubap1lG3UW59 384 aa16.06■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Dctn1O08788 1281 aa16.06■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ifit2Q64112 472 aa16.06■□□□□ 0.16
Rnf4-204ENSMUST00000182047 ImpactO55091 318 aa16.06■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Cyp7a1Q64505 503 aa16.06■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ltv1Q6NSQ7 470 aaKnown RBP16.06■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Arap2Q8BZ05 1703 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Gpr182P43142 395 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Anapc15P60007 132 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 NpeppsQ11011 920 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Pdzrn3Q69ZS0 1063 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ddx11Q6AXC6 880 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Rab3gap1Q80UJ7 981 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Emilin2Q8K482 1074 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Pus3Q9JI38 481 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ltbp1Q8CG19 1712 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Cyp2c23E9Q5K4 494 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 F2rP30558 430 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Fam102bQ8BQS4 339 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Golim4Q8BXA1 655 aa16.05■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Slc4a1P04919 929 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ftl2P49945 183 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Susd4Q8BH32 490 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Foxo4Q9WVH3 505 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Cntnap1O54991 1385 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 InhbeO08717 350 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Plcb3P51432 1234 aaKnown RBP16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Myh1Q5SX40 1942 aa16.04■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Vwa3bJ9JI28 736 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Zbtb38Q3LR78 1197 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Rhot2Q8JZN7 620 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 AnlnQ8K298 1121 aaKnown RBP16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Tbc1d4Q8BYJ6 1307 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ankrd31A0A140LI88 1765 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Rbm8a2A0A0N4SUH6 174 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 MecomP14404 1042 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Pde3bQ61409 1100 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Zkscan8Q8BSL0 588 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Rbm8aQ9CWZ3 174 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ush1cQ9ES64 910 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Rps6ka4Q9Z2B9 773 aa16.03■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ugt1a5B2RT14 529 aa16.02■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Smarcc1P97496 1104 aa16.02■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ripk4Q9ERK0 786 aa16.02■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Add2Q9QYB8 725 aa16.02■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Ak2Q9WTP6 239 aa16.02■□□□□ 0.16
Rnf4-204ENSMUST00000182047 Gjb2Q00977 226 aa16.02■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Ifit1bl2Q3U687 466 aa16.02■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Ciao1Q99KN2 339 aa16.02■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Ccne2Q9Z238 404 aa16.02■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Fkbp1aP26883 108 aaKnown RBP16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Gsdma2Q32M21 443 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Filip1lQ6P6L0 1131 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Ythdc1E9Q5K9 736 aaKnown RBP16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 ZyxQ62523 564 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Asap2Q7SIG6 958 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Gripap1Q8VD04 806 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Cdca7lQ922M5 438 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Rcan3Q9JKK0 239 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Gm13023A2A8N2 498 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Babam1Q3UI43 333 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Ubxn10Q8BG34 277 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Trim34aQ99PP6 485 aa16.01■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Nhsl1Q8CAF4 1587 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Pcmtd1P59913 357 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 VeztQ3ZK22 780 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Itga6Q61739 1091 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Naa30Q8CES0 364 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Greb1lB9EJV3 1913 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Zscan25B2RX31 543 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Irf5P56477 497 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Utp18Q5SSI6 552 aaKnown RBP16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 IncenpQ9WU62 880 aa16■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Bin2D3Z6Q9 489 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Ppfibp2O35711 882 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Cyp2d10P24456 504 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Gzf1Q4VBD9 706 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Pof1bQ8K4L4 587 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Tceanc2Q8R2M0 207 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Krt25Q8VCW2 446 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 NgdnQ9DB96 315 aaKnown RBP15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Abca3Q8R420 1704 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Tpm2P58774 284 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Lmbrd2Q8C561 694 aa15.99■□□□□ 0.15
Rnf4-204ENSMUST00000182047 Lrit1Q8K099 624 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms