RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Mybbp1aQ7TPV4 1344 aaKnown RBP13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Trim34bJ3QNR8 485 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 MecomP14404 1042 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Ftl2P49945 183 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 EvcP57680 1005 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Zbtb45Q52KG4 520 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Nek11Q8C0Q4 628 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Cchcr1Q8K2I2 770 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 GptQ8QZR5 496 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Krt25Q8VCW2 446 aa13.6□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Npc1l1Q6T3U4 1333 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Phactr2B1AVP0 632 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Ddit3P35639 168 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 RubcnlQ3TD16 648 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Rnf20Q5DTM8 973 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Adam1aQ60813 791 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 ZyxQ62523 564 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Dmrt2Q8BG36 561 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 SowahdQ8BY98 327 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 SnrkQ8VDU5 748 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Trim34aQ99PP6 485 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Ak2Q9WTP6 239 aa13.59□□□□□ -0.23
Vamp1-202ENSMUST00000063588 Rbm8a2A0A0N4SUH6 174 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Kcnb2A6H8H5 907 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Mdm2P23804 489 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Gjb2Q00977 226 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Stk11ipQ3TAA7 1072 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Slf2Q6P9P0 1278 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Sgsm2Q80U12 1005 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ppp4r3bQ922R5 820 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Gtf2a1Q99PM3 378 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Rbm8aQ9CWZ3 174 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Slx4ipQ9D7Y9 413 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Dpf1Q9QX66 387 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Hmg20bQ9Z104 317 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Myh3P13541 1940 aa13.58□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Timm10P62073 90 aa13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Miga2Q8BK03 593 aa13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Atf7Q8R0S1 413 aa13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 StrbpQ91WM1 672 aaKnown RBP13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Erc1Q99MI1 1120 aa13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Psma5Q9Z2U1 241 aaKnown RBP13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Znfx1Q8R151 1909 aaKnown RBP13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Scn11aQ9R053 1765 aa13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Cntnap1O54991 1385 aa13.57□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Fbxl16A2RT62 479 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 4930523C07RikE9Q2T4 99 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 TsksO54887 585 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Rtkn2Q14B46 604 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Vps54Q5SPW0 977 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ssh1Q76I79 1042 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 St18Q80TY4 1045 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Kcnq5Q9JK45 933 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Gpr182P43142 395 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Plbd2Q3TCN2 594 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Igflr1Q3U4N7 345 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Lrrc43Q3V0L5 667 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Slc38a10Q5I012 1090 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Cyp7a1Q64505 503 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Tti2Q8BGV4 512 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Zkscan8Q8BSL0 588 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Afg3l2Q8JZQ2 802 aaKnown RBP13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ncoa5Q91W39 579 aaKnown RBP13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Q9D9S1 216 aa13.56□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Slc4a1P04919 929 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ifit1bl2Q3U687 466 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 BcanQ61361 883 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Itga6Q61739 1091 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Bsdc1Q80Y55 427 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Fam160b2Q80YR2 744 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Eno4Q8C042 619 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Kiaa0319lQ8K135 1048 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Riok1Q922Q2 567 aa13.55□□□□□ -0.24
Vamp1-202ENSMUST00000063588 4931408C20RikE9PWP9 1381 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Nup98Q6PFD9 1816 aaKnown RBP13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Gm45015A0A140LII9 184 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Gm18336A0A140LIU8 765 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Cyp3a57D3YYZ0 503 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Hap1O35668 628 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Snai1Q02085 264 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Atp2b3Q0VF55 1220 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ddx46Q569Z5 1032 aaKnown RBP13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Susd4Q8BH32 490 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Golim4Q8BXA1 655 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ift57Q8BXG3 429 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Bag4Q8CI61 457 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Bloc1s4Q8VED2 215 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Tubb6Q922F4 447 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Plekho1Q9JIY0 408 aa13.54□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Ugt1a5B2RT14 529 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Sema6bO54951 886 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Npy5rO70342 466 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Snrpa1P57784 255 aaKnown RBP13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Smarcc1P97496 1104 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Il17raQ60943 864 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Dmrtc1Q9D9R7 182 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 NgdnQ9DB96 315 aaKnown RBP13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 Phrf1A6H619 1682 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 TnksQ6PFX9 1320 aa13.53□□□□□ -0.24
Vamp1-202ENSMUST00000063588 GakQ99KY4 1305 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 1319.3 ms