RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rabep1O35551 862 aa27.83■■■□□ 2.05
Upf3a-201ENSMUST00000043767 NfkbibQ60778 359 aa27.83■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Arid3aQ62431 601 aa27.83■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Hoxa7P02830 229 aa27.83■■■□□ 2.05
Upf3a-201ENSMUST00000043767 VeztQ3ZK22 780 aa27.83■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Unc5clQ6R653 518 aa27.82■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Ttc14Q9CSP9 761 aa27.82■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Fam102bQ8BQS4 339 aa27.82■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Ppp6r3Q922D4 844 aa27.82■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Bin2D3Z6Q9 489 aa27.81■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Slc38a10Q5I012 1090 aa27.81■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Msl1Q6PDM1 616 aa27.81■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Rab3gap1Q80UJ7 981 aa27.81■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Stk3Q9JI10 497 aa27.81■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Ccdc6D3YZP9 469 aa27.8■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Hmgb2P30681 210 aaKnown RBP27.8■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Zkscan8Q8BSL0 588 aa27.8■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Brf1Q8CFK2 676 aa27.8■■■□□ 2.04
Upf3a-201ENSMUST00000043767 EspnlQ3UYR4 1005 aa27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 EappQ5BU09 281 aa27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Kif2cQ922S8 721 aa27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Anapc15-psA0A140T8L6 141 aa27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Rbm26Q6NZN0 1012 aaKnown RBP27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Erc2Q6PH08 957 aa27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Gja10Q9WUS4 505 aa27.79■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Spata31d1bE9QA57 1361 aa27.78■■■□□ 2.04
Upf3a-201ENSMUST00000043767 NppbP40753 121 aa27.78■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Nucb1Q02819 459 aaKnown RBP27.78■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Lrp5Q91VN0 1614 aa27.78■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Snrpa1P57784 255 aaKnown RBP27.77■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Jdp2P97875 163 aa27.77■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Popdc2Q9ES82 367 aa27.77■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Apba2P98084 750 aa27.77■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Fam84aQ9D650 292 aa27.77■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Il1rapl2Q9ERS6 686 aa27.77■■■□□ 2.04
Upf3a-201ENSMUST00000043767 Atp8a2P98200 1148 aa27.76■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Gsdma2Q32M21 443 aa27.76■■■□□ 2.03
Upf3a-201ENSMUST00000043767 1810065E05RikQ5NC41 235 aa27.76■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Plcd4Q8K3R3 807 aa27.76■■■□□ 2.03
Upf3a-201ENSMUST00000043767 GorabQ8BRM2 368 aa27.75■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Sh3bp5Q9Z131 463 aa27.75■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Eva1cP58659 440 aa27.74■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Slc39a11Q8BWY7 342 aa27.74■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Brpf1B2RRD7 1212 aa27.74■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Noc3lQ8VI84 807 aaKnown RBP27.74■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Sf3b3Q921M3 1217 aaKnown RBP27.74■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Nphp3Q7TNH6 1325 aa27.73■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Tbc1d4Q8BYJ6 1307 aa27.73■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Vps54Q5SPW0 977 aa27.73■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Tnpo1Q8BFY9 898 aaKnown RBP27.72■■■□□ 2.03
Upf3a-201ENSMUST00000043767 4933402E13RikQ9D4D2 429 aa27.72■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Slc4a1P04919 929 aa27.72■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Plekho1Q9JIY0 408 aa27.72■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Asap2Q7SIG6 958 aa27.71■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Lgr5Q9Z1P4 907 aa27.71■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Kif13bA0A286YCV9 1847 aa27.71■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Plekhf1Q3TB82 279 aa27.71■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Ccne2Q9Z238 404 aa27.71■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Kdm3aQ6PCM1 1323 aa27.7■■■□□ 2.03
Upf3a-201ENSMUST00000043767 Hsp90b1P08113 802 aaKnown RBP27.7■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Nol8Q3UHX0 1147 aaKnown RBP27.7■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Ipo4Q8VI75 1082 aa27.7■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Pde8bE9Q4S1 865 aa27.69■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Atp2b3Q0VF55 1220 aa27.69■■■□□ 2.02
Upf3a-201ENSMUST00000043767 1700029H14RikE9PY36 240 aa27.69■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Kif23E9Q5G3 953 aa27.69■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Plbd2Q3TCN2 594 aa27.69■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Chrna2Q91X60 512 aa27.69■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Znf496Q5SXI5 585 aa27.68■■■□□ 2.02
Upf3a-201ENSMUST00000043767 CpvlQ9D3S9 478 aa27.68■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Rbbp8nlA2ABX0 614 aa27.66■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Ppip5k2Q6ZQB6 1129 aa27.66■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Tmem143Q8VD26 458 aa27.66■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Antxr1Q9CZ52 562 aa27.66■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Ube4aE9Q735 1028 aa27.66■■■□□ 2.02
Upf3a-201ENSMUST00000043767 TsksO54887 585 aa27.66■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Tmem266Q8BZB3 538 aa27.65■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Sned1Q70E20 1403 aa27.65■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Gm7347D3YYI9 267 aa27.64■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Aknad1E9Q8N6 675 aa27.64■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Speer4aF8VPX6 267 aa27.64■■■□□ 2.02
Upf3a-201ENSMUST00000043767 ZyxQ62523 564 aa27.64■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Rbm5Q91YE7 815 aaKnown RBP27.64■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Tfip11Q9ERA6 838 aaKnown RBP27.64■■■□□ 2.02
Upf3a-201ENSMUST00000043767 Atxn2lQ7TQH0 1049 aaKnown RBP27.64■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Ddx46Q569Z5 1032 aaKnown RBP27.63■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Krt25Q8VCW2 446 aa27.63■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Sptlc3Q8BG54 563 aa27.63■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Rhot2Q8JZN7 620 aa27.63■■■□□ 2.01
Upf3a-201ENSMUST00000043767 ArxO35085 564 aa27.62■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Mctp2Q5RJH2 878 aa27.62■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Ezh2Q61188 746 aaKnown RBP27.62■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Sde2Q8K1J5 448 aaKnown RBP27.62■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Sept1P42209 366 aa27.61■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Kcnq5Q9JK45 933 aa27.61■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Ltv1Q6NSQ7 470 aaKnown RBP27.61■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Golim4Q8BXA1 655 aa27.61■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Rps8P62242 208 aaKnown RBP27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 IntuQ059U7 942 aa27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Ift57Q8BXG3 429 aa27.6■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms