RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 HDHD5Q9BXW7 423 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ANKRD19PQ9H560 264 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GPN2Q9H9Y4 310 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 NANSQ9NR45 359 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 POLE3Q9NRF9 147 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 KLRF1Q9NZS2 232 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TNFRSF10DQ9UBN6 386 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GPN3Q9UHW5 284 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 CFL2Q9Y281 166 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PMF1-BGLAPU3KQ54 211 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CUL9Q8IWT3 2517 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 LAMA5O15230 3695 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RTTNQ86VV8 2226 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 IGKV1D-42A0A075B6H8 117 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PPK0 400 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RIIAD1A6NNX1 92 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 B4DXG7 233 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TSPAN2O60636 221 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CPNE3O75131 537 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 PTP4A3O75365 173 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CLEC2LP0C7M8 214 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LIMS3P0CW19 117 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LIMS4P0CW20 117 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 PYCR1P32322 319 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 EVI2BP34910 448 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DUSP3P51452 185 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 NRG3P56975 720 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CTXN1P60606 82 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 EFNB1P98172 346 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 EGR4Q05215 589 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 IRF3Q14653 427 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 NCF4Q15080 339 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 COL28A1Q2UY09 1125 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 C22orf42Q6IC83 251 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 WBP2NLQ6ICG8 309 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RPTNQ6XPR3 784 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RTL4Q6ZR62 310 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TMPRSS11FQ6ZWK6 438 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 GRAMD2AQ8IUY3 354 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RNF113BQ8IZP6 322 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 NANOGP1Q8N7R0 232 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LSMEM1Q8N8F7 131 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 PLPP5Q8NEB5 264 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 OR10G3Q8NGC4 313 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SPRYD4Q8WW59 207 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 NR4A3Q92570 626 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TAAR8Q969N4 342 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 JSRP1Q96MG2 331 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 WDR77Q9BQA1 342 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 CDCA4Q9BXL8 241 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DEFB126Q9BYW3 111 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SNTG1Q9NSN8 517 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 C14orf105Q9NVL8 296 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CNOT2Q9NZN8 540 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 OSGIN1Q9UJX0 560 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 MRTO4Q9UKD2 239 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 FBXO4Q9UKT5 387 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC35A3Q9Y2D2 325 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TEX13CA0A0J9YWL9 993 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SAGE2PA6NJ88 616 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 J3QLW9 94 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CCRL2O00421 344 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TOX3O15405 576 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 MAGEB3O15480 346 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RGS5O15539 181 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 FMO6PO60774 539 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC25A12O75746 678 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CLPXO76031 633 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 HMGN1P05114 100 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 JMJD7P0C870 316 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TFPIP10646 304 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZNF19P17023 458 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TCN2P20062 427 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 IL11P20809 199 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ACVR1BP36896 505 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 GAS1P54826 345 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC26A5P58743 744 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RPS25P62851 125 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 FHL1Q13642 323 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 C1DQ13901 141 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 QPRTQ15274 297 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CRTC2Q53ET0 693 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 KLHL22Q53GT1 634 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 C3orf38Q5JPI3 329 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TMEM201Q5SNT2 666 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 MEDAGQ5VYS4 303 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZNF385CQ66K41 422 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 C16orf87Q6PH81 154 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CARFQ8N187 725 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZNF511Q8NB15 262 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 NFAM1Q8NET5 270 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 MCFD2Q8NI22 146 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DNAJA4Q8WW22 397 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 FCGR1BQ92637 280 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 FGF11Q92914 225 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CRELD1Q96HD1 420 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DCLRE1CQ96SD1 692 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 TEAD3Q99594 435 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CMKLR1Q99788 373 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 MND1Q9BWT6 205 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms