RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 MAGEL2Q9UJ55 1249 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 MRPS18CQ9Y3D5 142 aaKnown RBP13.11□□□□□ -0.31
COMMD4-225ENST00000569245 SNX13Q9Y5W8 968 aa13.11□□□□□ -0.31
COMMD4-225ENST00000569245 KDM4EB2RXH2 506 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-225ENST00000569245 DVL2O14641 736 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 NDUFB5O43674 189 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 TFPTP0C1Z6 253 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 OR12D1P0DN82 309 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 CPN1P15169 458 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 TBXA2RP21731 343 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 BMP5P22003 454 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 GFRA1P56159 465 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 ACTR3P61158 418 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 GANABQ14697 944 aaKnown RBP13.1□□□□□ -0.31
COMMD4-225ENST00000569245 SLC25A35Q3KQZ1 300 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 CCNJQ5T5M9 372 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 C1orf146Q5VVC0 180 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 LCN8Q6JVE9 175 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 CHMP1BQ7LBR1 199 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 DHFR2Q86XF0 187 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 FADS6Q8N9I5 356 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 GATSQ8NAP1 163 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 OR5D16Q8NGK9 328 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 OR4C3Q8NH37 302 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 TUBA1CQ9BQE3 449 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 PIGUQ9H490 435 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-225ENST00000569245 GORASP2Q9H8Y8 452 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 CALHM2Q9HA72 323 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-225ENST00000569245 UBQLN4Q9NRR5 601 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 DUSP22Q9NRW4 184 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 EGFL7Q9UHF1 273 aa13.1□□□□□ -0.31
COMMD4-225ENST00000569245 NCKAP5O14513 1909 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 PRAMEF27A3QJZ7 478 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 B4DXG7 233 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 CXCR6O00574 342 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 SCDO00767 359 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 ARPC2O15144 300 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 GSTA4O15217 222 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 GMNNO75496 209 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 STAMBPO95630 424 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 OXSR1O95747 527 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-225ENST00000569245 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-225ENST00000569245 CHMP24386 653 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 MSX1P28360 303 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 TIMP3P35625 211 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 CDK6Q00534 326 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 TFF3Q07654 80 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 SCARB2Q14108 478 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 FLOT2Q14254 428 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 GNA13Q14344 377 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 MAPK11Q15759 364 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.09□□□□□ -0.31
COMMD4-225ENST00000569245 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 HEPHL1Q6MZM0 1159 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 UBQLNLQ8IYU4 475 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 NAXEQ8NCW5 288 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 HIPK4Q8NE63 616 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 OR5M1Q8NGP8 315 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 FAM110BQ8TC76 370 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 SLC38A5Q8WUX1 472 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 XAGE5Q8WWM1 108 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 RAB8BQ92930 207 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 MAL2Q969L2 176 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 C1GALT1C1Q96EU7 318 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 ENKD1Q9H0I2 346 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 HHATLQ9HCP6 504 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 EXD2Q9NVH0 621 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 LRBAP50851 2863 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 EXPH5Q8NEV8 1989 aa13.09□□□□□ -0.31
COMMD4-225ENST00000569245 TMEM247A6NEH6 219 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 AQP12BA6NM10 295 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ALG1L2C9J202 215 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 AK1P00568 194 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 NGFRP08138 427 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 NCK1P16333 377 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ATP6V1B2P21281 511 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 SSTR2P30874 369 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 LCN1P31025 176 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 UQCRC1P31930 480 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 CEACAM8P31997 349 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-225ENST00000569245 LHX2P50458 406 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-225ENST00000569245 FUT5Q11128 374 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
COMMD4-225ENST00000569245 MTX3Q5HYI7 312 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 INTS11Q5TA45 600 aaKnown RBP13.08□□□□□ -0.32
COMMD4-225ENST00000569245 AP1ARQ63HQ0 302 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms