RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17asnR17a GIC1P38785 314 aa4.34□□□□□ -1.71
snR17asnR17a FAF1P40546 346 aaPredicted RBP4.34□□□□□ -1.71
snR17asnR17a CHA4P43634 648 aa4.34□□□□□ -1.71
snR17asnR17a SHE9Q04172 456 aa4.34□□□□□ -1.71
snR17asnR17a OPI10Q08202 246 aa4.34□□□□□ -1.71
snR17asnR17a SSF2Q12153 453 aaPredicted RBP4.34□□□□□ -1.71
snR17asnR17a CLF1Q12309 687 aaPredicted RBP4.34□□□□□ -1.71
snR17asnR17a SNU66Q12420 587 aaPredicted RBP4.34□□□□□ -1.71
snR17asnR17a SPE1P08432 466 aa4.33□□□□□ -1.72
snR17asnR17a SSB1P11484 613 aaKnown RBP4.33□□□□□ -1.72
snR17asnR17a PPH3P32345 308 aa4.33□□□□□ -1.72
snR17asnR17a SCT1P32784 759 aa4.33□□□□□ -1.72
snR17asnR17a SRP101P32916 621 aa4.33□□□□□ -1.72
snR17asnR17a MUM2P38236 366 aa4.33□□□□□ -1.72
snR17asnR17a MBP1P39678 833 aa4.33□□□□□ -1.72
snR17asnR17a SSB2P40150 613 aaKnown RBP4.33□□□□□ -1.72
snR17asnR17a YGL081WP53156 320 aa4.33□□□□□ -1.72
snR17asnR17a RCF1Q03713 159 aa4.33□□□□□ -1.72
snR17asnR17a DUS3Q06053 668 aaKnown RBP4.33□□□□□ -1.72
snR17asnR17a CDA1Q06702 301 aa4.33□□□□□ -1.72
snR17asnR17a HSP42Q12329 375 aa4.33□□□□□ -1.72
snR17asnR17a CDC12P32468 407 aaKnown RBP4.32□□□□□ -1.72
snR17asnR17a VBA5P36172 582 aa4.32□□□□□ -1.72
snR17asnR17a PES4P39684 611 aa4.32□□□□□ -1.72
snR17asnR17a SEC27P41811 889 aaKnown RBP4.32□□□□□ -1.72
snR17asnR17a PHO23P50947 330 aa4.32□□□□□ -1.72
snR17asnR17a HOS2P53096 452 aaPredicted RBP4.32□□□□□ -1.72
snR17asnR17a PIL1P53252 339 aaKnown RBP4.32□□□□□ -1.72
snR17asnR17a ESF2P53743 316 aaKnown RBP4.32□□□□□ -1.72
snR17asnR17a CTF4Q01454 927 aa4.32□□□□□ -1.72
snR17asnR17a MDM1Q01846 1127 aa4.32□□□□□ -1.72
snR17asnR17a NSE3Q05541 303 aa4.32□□□□□ -1.72
snR17asnR17a YSH1Q06224 779 aaPredicted RBP4.32□□□□□ -1.72
snR17asnR17a IMH1Q06704 911 aaKnown RBP4.32□□□□□ -1.72
snR17asnR17a MRP8P35719 219 aa4.31□□□□□ -1.72
snR17asnR17a YKR078WP36158 585 aaKnown RBP4.31□□□□□ -1.72
snR17asnR17a SEC9P40357 651 aa4.31□□□□□ -1.72
snR17asnR17a GYP7P48365 746 aa4.31□□□□□ -1.72
snR17asnR17a CEF1Q03654 590 aaPredicted RBP4.31□□□□□ -1.72
snR17asnR17a YPR196WQ06595 470 aa4.31□□□□□ -1.72
snR17asnR17a CYB2P00175 591 aa4.3□□□□□ -1.72
snR17asnR17a ADE8P04161 214 aa4.3□□□□□ -1.72
snR17asnR17a TRX2P22803 104 aaKnown RBP4.3□□□□□ -1.72
snR17asnR17a SWI3P32591 825 aa4.3□□□□□ -1.72
snR17asnR17a YER158CP40095 573 aa4.3□□□□□ -1.72
snR17asnR17a MEP1P40260 492 aa4.3□□□□□ -1.72
snR17asnR17a GUS1P46655 708 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
snR17asnR17a TCB2P48231 1178 aa4.3□□□□□ -1.72
snR17asnR17a EXG2P52911 562 aa4.3□□□□□ -1.72
snR17asnR17a SUN4P53616 420 aa4.3□□□□□ -1.72
snR17asnR17a SVL3Q03088 825 aaKnown RBP4.3□□□□□ -1.72
snR17asnR17a YPR172WQ06608 200 aa4.3□□□□□ -1.72
snR17asnR17a YDR306CQ06640 478 aa4.3□□□□□ -1.72
snR17asnR17a NKP1Q12493 238 aa4.3□□□□□ -1.72
snR17asnR17a PFK1P16861 987 aaKnown RBP4.29□□□□□ -1.72
snR17asnR17a PRI2P20457 528 aa4.29□□□□□ -1.72
snR17asnR17a MSM1P22438 575 aa4.29□□□□□ -1.72
snR17asnR17a SSD1P24276 1250 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
snR17asnR17a RPN12P32496 274 aa4.29□□□□□ -1.72
snR17asnR17a PBY1P38254 753 aa4.29□□□□□ -1.72
snR17asnR17a URM1P40554 99 aaPredicted RBP4.29□□□□□ -1.72
snR17asnR17a VPS4P52917 437 aa4.29□□□□□ -1.72
snR17asnR17a AIM39Q08223 395 aa4.29□□□□□ -1.72
snR17asnR17a ENB1Q08299 606 aa4.29□□□□□ -1.72
snR17asnR17a KCS1Q12494 1050 aa4.29□□□□□ -1.72
snR17asnR17a YOL098CQ12496 1037 aa4.29□□□□□ -1.72
snR17asnR17a VPS5Q92331 675 aa4.29□□□□□ -1.72
snR17asnR17a CIT2P08679 460 aa4.28□□□□□ -1.72
snR17asnR17a CDC48P25694 835 aaKnown RBP4.28□□□□□ -1.72
snR17asnR17a AAR2P32357 355 aaPredicted RBP4.28□□□□□ -1.72
snR17asnR17a GRX4P32642 244 aa4.28□□□□□ -1.72
snR17asnR17a NPR3P38742 1146 aa4.28□□□□□ -1.72
snR17asnR17a VAC8P39968 578 aa4.28□□□□□ -1.72
snR17asnR17a IRR1P40541 1150 aa4.28□□□□□ -1.72
snR17asnR17a GPI8P49018 411 aa4.28□□□□□ -1.72
snR17asnR17a SFB2P53953 876 aa4.28□□□□□ -1.72
snR17asnR17a RIX7Q07844 837 aaKnown RBP4.28□□□□□ -1.72
snR17asnR17a GUP2Q08929 609 aa4.28□□□□□ -1.72
snR17asnR17a SGT2Q12118 346 aaKnown RBP4.28□□□□□ -1.72
snR17asnR17a NPC2Q12408 173 aa4.28□□□□□ -1.72
snR17asnR17a SEC6P32844 805 aa4.27□□□□□ -1.73
snR17asnR17a STE5P32917 917 aa4.27□□□□□ -1.73
snR17asnR17a TFC3P34111 1160 aa4.27□□□□□ -1.73
snR17asnR17a GRX7P38068 203 aa4.27□□□□□ -1.73
snR17asnR17a FUI1P38196 639 aa4.27□□□□□ -1.73
snR17asnR17a NPP2P39997 493 aa4.27□□□□□ -1.73
snR17asnR17a RAI1P53063 387 aaKnown RBP4.27□□□□□ -1.73
snR17asnR17a NCS6P53088 359 aa4.27□□□□□ -1.73
snR17asnR17a ALG12P53730 551 aa4.27□□□□□ -1.73
snR17asnR17a VPS30Q02948 557 aa4.27□□□□□ -1.73
snR17asnR17a PHM6Q05637 104 aa4.27□□□□□ -1.73
snR17asnR17a CEX1Q12453 761 aa4.27□□□□□ -1.73
snR17asnR17a PRP9P19736 530 aaKnown RBP4.26□□□□□ -1.73
snR17asnR17a HRR25P29295 494 aaKnown RBP4.26□□□□□ -1.73
snR17asnR17a SRP40P32583 406 aaPredicted RBP4.26□□□□□ -1.73
snR17asnR17a YKL069WP36088 180 aa4.26□□□□□ -1.73
snR17asnR17a PIM1P36775 1133 aa4.26□□□□□ -1.73
snR17asnR17a TSL1P38427 1098 aaKnown RBP4.26□□□□□ -1.73
snR17asnR17a MSS4P38994 779 aa4.26□□□□□ -1.73
snR17asnR17a FUN12P39730 1002 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms