RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W SBA1P28707 216 aaKnown RBP4.07□□□□□ -1.76
MRPL40YPL173W PEX2P32800 271 aa4.07□□□□□ -1.76
MRPL40YPL173W YBR184WP38299 523 aa4.07□□□□□ -1.76
MRPL40YPL173W SDS3P40505 327 aa4.07□□□□□ -1.76
MRPL40YPL173W TIM54P47045 478 aa4.07□□□□□ -1.76
MRPL40YPL173W ERG5P54781 538 aa4.07□□□□□ -1.76
MRPL40YPL173W SLU7Q02775 382 aaKnown RBP4.07□□□□□ -1.76
MRPL40YPL173W SHE9Q04172 456 aa4.07□□□□□ -1.76
MRPL40YPL173W YLR225CQ05948 407 aaKnown RBP4.07□□□□□ -1.76
MRPL40YPL173W YOR131CQ12486 218 aa4.07□□□□□ -1.76
MRPL40YPL173W RPL8BP29453 256 aaKnown RBP4.06□□□□□ -1.76
MRPL40YPL173W STE14P32584 239 aa4.06□□□□□ -1.76
MRPL40YPL173W TIM23P32897 222 aa4.06□□□□□ -1.76
MRPL40YPL173W MOT2P34909 587 aaKnown RBP4.06□□□□□ -1.76
MRPL40YPL173W VBA5P36172 582 aa4.06□□□□□ -1.76
MRPL40YPL173W NUP82P40368 713 aa4.06□□□□□ -1.76
MRPL40YPL173W PFD1P46988 109 aa4.06□□□□□ -1.76
MRPL40YPL173W FMP25Q08023 583 aa4.06□□□□□ -1.76
MRPL40YPL173W FLC1Q08967 793 aa4.06□□□□□ -1.76
MRPL40YPL173W SUT2Q12286 268 aa4.06□□□□□ -1.76
MRPL40YPL173W INO1P11986 533 aa4.05□□□□□ -1.76
MRPL40YPL173W RSP5P39940 809 aaKnown RBP4.05□□□□□ -1.76
MRPL40YPL173W NPP2P39997 493 aa4.05□□□□□ -1.76
MRPL40YPL173W SPO20Q04359 397 aa4.05□□□□□ -1.76
MRPL40YPL173W IRR1P40541 1150 aa4.04□□□□□ -1.76
MRPL40YPL173W HBT1Q07653 1046 aaKnown RBP4.04□□□□□ -1.76
MRPL40YPL173W AFT2Q08957 416 aa4.04□□□□□ -1.76
MRPL40YPL173W BNR1P40450 1375 aa4.03□□□□□ -1.76
MRPL40YPL173W ERR1P0CX10 437 aa4.03□□□□□ -1.76
MRPL40YPL173W ERR2P0CX11 437 aa4.03□□□□□ -1.76
MRPL40YPL173W MRP8P35719 219 aa4.03□□□□□ -1.76
MRPL40YPL173W PBY1P38254 753 aa4.03□□□□□ -1.76
MRPL40YPL173W FPR3P38911 411 aaKnown RBP4.03□□□□□ -1.76
MRPL40YPL173W CHZ1P40019 153 aaPredicted RBP4.03□□□□□ -1.76
MRPL40YPL173W YGR125WP53273 1036 aa4.03□□□□□ -1.76
MRPL40YPL173W UTP8P53276 713 aaKnown RBP4.03□□□□□ -1.76
MRPL40YPL173W MRH1Q12117 320 aaPredicted RBP4.03□□□□□ -1.76
MRPL40YPL173W RKM4Q12504 494 aa4.03□□□□□ -1.76
MRPL40YPL173W CIT1P00890 479 aa4.02□□□□□ -1.77
MRPL40YPL173W CAN1P04817 590 aa4.02□□□□□ -1.77
MRPL40YPL173W PHO8P11491 566 aa4.02□□□□□ -1.77
MRPL40YPL173W MDM10P18409 493 aa4.02□□□□□ -1.77
MRPL40YPL173W YGL176CP46945 554 aa4.02□□□□□ -1.77
MRPL40YPL173W SPO75Q07798 868 aa4.02□□□□□ -1.77
MRPL40YPL173W MET6P05694 767 aaKnown RBP4.01□□□□□ -1.77
MRPL40YPL173W HSP60P19882 572 aaKnown RBP4.01□□□□□ -1.77
MRPL40YPL173W SED4P25365 1065 aa4.01□□□□□ -1.77
MRPL40YPL173W YKL107WP34251 309 aa4.01□□□□□ -1.77
MRPL40YPL173W PPS1P38148 807 aa4.01□□□□□ -1.77
MRPL40YPL173W MBP1P39678 833 aa4.01□□□□□ -1.77
MRPL40YPL173W KRI1P42846 591 aaKnown RBP4.01□□□□□ -1.77
MRPL40YPL173W RTA1P53047 317 aa4.01□□□□□ -1.77
MRPL40YPL173W ERP6P53198 216 aa4.01□□□□□ -1.77
MRPL40YPL173W IMO32P53219 342 aa4.01□□□□□ -1.77
MRPL40YPL173W SFB2P53953 876 aa4.01□□□□□ -1.77
MRPL40YPL173W TAF8Q03750 510 aa4.01□□□□□ -1.77
MRPL40YPL173W HOF1Q05080 669 aa4.01□□□□□ -1.77
MRPL40YPL173W COQ11Q05892 277 aa4.01□□□□□ -1.77
MRPL40YPL173W EAF1Q06337 982 aa4.01□□□□□ -1.77
MRPL40YPL173W YLR125WQ12138 136 aa4.01□□□□□ -1.77
MRPL40YPL173W ICT1Q12385 394 aa4.01□□□□□ -1.77
MRPL40YPL173W OSH2Q12451 1283 aa4.01□□□□□ -1.77
MRPL40YPL173W GAL11P19659 1081 aa4□□□□□ -1.77
MRPL40YPL173W RPC82P32349 654 aa4□□□□□ -1.77
MRPL40YPL173W PIN4P34217 668 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
MRPL40YPL173W BET3P36149 193 aa4□□□□□ -1.77
MRPL40YPL173W GGA2P38817 585 aaKnown RBP4□□□□□ -1.77
MRPL40YPL173W MNN1P39106 762 aa4□□□□□ -1.77
MRPL40YPL173W UBX5Q06682 500 aa4□□□□□ -1.77
MRPL40YPL173W ARE1P25628 610 aa3.99□□□□□ -1.77
MRPL40YPL173W HBS1P32769 611 aaKnown RBP3.99□□□□□ -1.77
MRPL40YPL173W PPZ2P33329 710 aa3.99□□□□□ -1.77
MRPL40YPL173W ALR2P43553 858 aa3.99□□□□□ -1.77
MRPL40YPL173W YJR142WP47173 342 aa3.99□□□□□ -1.77
MRPL40YPL173W POB3Q04636 552 aaKnown RBP3.99□□□□□ -1.77
MRPL40YPL173W YAP7Q08182 245 aa3.99□□□□□ -1.77
MRPL40YPL173W FRE5Q08908 694 aa3.99□□□□□ -1.77
MRPL40YPL173W THI4P32318 326 aa3.98□□□□□ -1.77
MRPL40YPL173W YHL017WP38745 532 aa3.98□□□□□ -1.77
MRPL40YPL173W SAH1P39954 449 aaKnown RBP3.98□□□□□ -1.77
MRPL40YPL173W MAL11P53048 616 aa3.98□□□□□ -1.77
MRPL40YPL173W YNL162W-AQ3E7A8 72 aa3.98□□□□□ -1.77
MRPL40YPL173W PRP9P19736 530 aaKnown RBP3.97□□□□□ -1.77
MRPL40YPL173W MSH2P25847 964 aa3.97□□□□□ -1.77
MRPL40YPL173W SEC21P32074 935 aaKnown RBP3.97□□□□□ -1.77
MRPL40YPL173W FLO10P36170 1169 aa3.97□□□□□ -1.77
MRPL40YPL173W TDP1P38319 544 aa3.97□□□□□ -1.77
MRPL40YPL173W RIX1P38883 763 aaPredicted RBP3.97□□□□□ -1.77
MRPL40YPL173W GUS1P46655 708 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
MRPL40YPL173W DAS1P47005 663 aa3.97□□□□□ -1.77
MRPL40YPL173W RAI1P53063 387 aaKnown RBP3.97□□□□□ -1.77
MRPL40YPL173W TUB1P09733 447 aaKnown RBP3.96□□□□□ -1.78
MRPL40YPL173W TOP3P13099 656 aa3.96□□□□□ -1.78
MRPL40YPL173W CDC12P32468 407 aaKnown RBP3.96□□□□□ -1.78
MRPL40YPL173W TMT1P32643 299 aa3.96□□□□□ -1.78
MRPL40YPL173W HUL4P40985 892 aa3.96□□□□□ -1.78
MRPL40YPL173W TAH11P47112 604 aa3.96□□□□□ -1.78
MRPL40YPL173W PEX19Q07418 342 aa3.96□□□□□ -1.78
MRPL40YPL173W NTG2Q08214 380 aa3.96□□□□□ -1.78
MRPL40YPL173W HBN1Q96VH4 193 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms