RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	NOC3	Q07896	663 aa	Predicted RBP	11.39	□□□□□ -0.59
HHO1	YPL127C	JNM1	P36224	373 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	SPR3	P41901	512 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	TAM41	P53230	385 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	ESBP6	P53918	673 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	SOV1	Q04748	898 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	CST9	Q06032	482 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	DUS4	Q06063	367 aa		11.38	□□□□□ -0.59
HHO1	YPL127C	CDC53	Q12018	815 aa	Known RBP	11.38	□□□□□ -0.59
HHO1	YPL127C	DED1	P06634	604 aa	Known RBP	11.37	□□□□□ -0.59
HHO1	YPL127C	YKL023W	P36103	277 aa	Known RBP	11.37	□□□□□ -0.59
HHO1	YPL127C	MMM1	P41800	426 aa		11.37	□□□□□ -0.59
HHO1	YPL127C	ENV11	P53246	860 aa		11.37	□□□□□ -0.59
HHO1	YPL127C	COQ9	Q05779	260 aa		11.37	□□□□□ -0.59
HHO1	YPL127C	MSC6	Q08818	692 aa	Known RBP	11.37	□□□□□ -0.59
HHO1	YPL127C	LTV1	P34078	463 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	BYE1	P36106	594 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	ERC1	P38767	581 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	SHE10	P53075	577 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	RTT102	P53330	157 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	NCR1	Q12200	1170 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	OSW2	Q12202	724 aa		11.36	□□□□□ -0.59
HHO1	YPL127C	MUD1	P32605	298 aa	Known RBP	11.35	□□□□□ -0.59
HHO1	YPL127C	ASH1	P34233	588 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	APE3	P37302	537 aa	Known RBP	11.35	□□□□□ -0.59
HHO1	YPL127C	RSC30	P38781	883 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	SET5	P38890	526 aa	Known RBP	11.35	□□□□□ -0.59
HHO1	YPL127C	YMR124W	P39523	943 aa	Known RBP	11.35	□□□□□ -0.59
HHO1	YPL127C	AVT1	P47082	602 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	YGR021W	P53212	290 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	11.35	□□□□□ -0.59	not detected
HHO1	YPL127C	YMR321C	Q04898	105 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	IES4	Q08561	116 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	TRM11	Q12463	433 aa		11.35	□□□□□ -0.59
HHO1	YPL127C	TRP2	P00899	507 aa	Known RBP	11.34	□□□□□ -0.59
HHO1	YPL127C	SNF1	P06782	633 aa	Known RBP	11.34	□□□□□ -0.59
HHO1	YPL127C	KIP1	P28742	1111 aa		11.34	□□□□□ -0.59
HHO1	YPL127C	RGT1	P32862	1170 aa		11.34	□□□□□ -0.59
HHO1	YPL127C	TIM23	P32897	222 aa		11.34	□□□□□ -0.59
HHO1	YPL127C	PRP31	P49704	494 aa	Predicted RBP	11.34	□□□□□ -0.59
HHO1	YPL127C	BTN2	P53286	410 aa		11.34	□□□□□ -0.59
HHO1	YPL127C	VTC3	Q02725	835 aa		11.34	□□□□□ -0.59
HHO1	YPL127C	SIL1	Q08199	421 aa		11.34	□□□□□ -0.59
HHO1	YPL127C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.33	□□□□□ -0.6	not detected
HHO1	YPL127C	EFT1	P32324	842 aa	Known RBP	11.33	□□□□□ -0.6
HHO1	YPL127C	RAD54	P32863	898 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	CAB3	P36076	571 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	SMF1	P38925	575 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	EAF5	P39995	279 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	NPP2	P39997	493 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	MXR1	P40029	184 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	SYH1	Q02875	849 aa	Known RBP	11.33	□□□□□ -0.6
HHO1	YPL127C	POB3	Q04636	552 aa	Known RBP	11.33	□□□□□ -0.6
HHO1	YPL127C	GPI13	Q07830	1017 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	YLR001C	Q07895	862 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	YLL058W	Q12198	575 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	YDL206W	Q12424	762 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	OSH2	Q12451	1283 aa		11.33	□□□□□ -0.6
HHO1	YPL127C	VMA1	P17255	1071 aa	Known RBP	11.32	□□□□□ -0.6
HHO1	YPL127C	YUR1	P26725	428 aa		11.32	□□□□□ -0.6
HHO1	YPL127C	CNS1	P33313	385 aa		11.32	□□□□□ -0.6
HHO1	YPL127C	CCT4	P39078	528 aa	Known RBP	11.32	□□□□□ -0.6
HHO1	YPL127C	SGM1	P47166	707 aa		11.32	□□□□□ -0.6
HHO1	YPL127C	RPS7B	P48164	190 aa	Known RBP	11.32	□□□□□ -0.6
HHO1	YPL127C	UTP14	Q04500	899 aa	Known RBP	11.32	□□□□□ -0.6
HHO1	YPL127C	RPO26	P20435	155 aa		11.31	□□□□□ -0.6
HHO1	YPL127C	IRE1	P32361	1115 aa		11.31	□□□□□ -0.6
HHO1	YPL127C	DPH2	P32461	534 aa		11.31	□□□□□ -0.6
HHO1	YPL127C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.31	□□□□□ -0.6	not detected
HHO1	YPL127C	MOT2	P34909	587 aa	Known RBP	11.31	□□□□□ -0.6
HHO1	YPL127C	KIC1	P38692	1080 aa		11.31	□□□□□ -0.6
HHO1	YPL127C	YNL146W	P53906	100 aa		11.31	□□□□□ -0.6
HHO1	YPL127C	YML082W	Q04533	649 aa	Known RBP	11.31	□□□□□ -0.6
HHO1	YPL127C	ERG11	P10614	530 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	BLI1	P35727	113 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	MAD1	P40957	749 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	JJJ3	P47138	172 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	VPS70	P47161	811 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	HSH155	P49955	971 aa	Known RBP	11.3	□□□□□ -0.6
HHO1	YPL127C	KAP114	P53067	1004 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	ATG1	P53104	897 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	RPA49	Q01080	415 aa	Predicted RBP	11.3	□□□□□ -0.6
HHO1	YPL127C	RRB1	Q04225	511 aa	Known RBP	11.3	□□□□□ -0.6
HHO1	YPL127C	SLX4	Q12098	748 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	HIF1	Q12373	385 aa		11.3	□□□□□ -0.6
HHO1	YPL127C	NAT1	P12945	854 aa	Known RBP	11.29	□□□□□ -0.6
HHO1	YPL127C	KIN82	P25341	720 aa		11.29	□□□□□ -0.6
HHO1	YPL127C	SEC21	P32074	935 aa	Known RBP	11.29	□□□□□ -0.6
HHO1	YPL127C	PSY2	P40164	858 aa		11.29	□□□□□ -0.6
HHO1	YPL127C	PSP2	P50109	593 aa	Known RBP	11.29	□□□□□ -0.6
HHO1	YPL127C	CUL3	P53202	744 aa		11.29	□□□□□ -0.6
HHO1	YPL127C	YMR018W	Q04364	514 aa		11.29	□□□□□ -0.6
HHO1	YPL127C	YMR114C	Q04471	368 aa	Known RBP	11.29	□□□□□ -0.6
HHO1	YPL127C	ECM7	Q06200	448 aa		11.29	□□□□□ -0.6
HHO1	YPL127C	HFI1	Q12060	488 aa		11.29	□□□□□ -0.6
HHO1	YPL127C	CDC33	P07260	213 aa	Known RBP	11.28	□□□□□ -0.6
HHO1	YPL127C	PAP1	P29468	568 aa	Known RBP	11.28	□□□□□ -0.6
HHO1	YPL127C	TRZ1	P36159	838 aa	Predicted RBP	11.28	□□□□□ -0.6
HHO1	YPL127C	FTR1	P40088	404 aa		11.28	□□□□□ -0.6
HHO1	YPL127C	YML020W	Q03722	664 aa		11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms