RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP16	YPL072W	SDP1	P40479	209 aa		4.18	□□□□□ -1.74
UBP16	YPL072W	SLU7	Q02775	382 aa	Known RBP	4.18	□□□□□ -1.74
UBP16	YPL072W	HBN1	Q96VH4	193 aa		4.18	□□□□□ -1.74
UBP16	YPL072W	TRP4	P07285	380 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP16	YPL072W	RPD3	P32561	433 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	TYE7	P33122	291 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP16	YPL072W	PET10	P36139	283 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	KTR4	P38131	464 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	YIL108W	P40483	696 aa	Known RBP	4.17	□□□□□ -1.74
UBP16	YPL072W	NOP7	P53261	605 aa	Known RBP	4.17	□□□□□ -1.74
UBP16	YPL072W	HDA1	P53973	706 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	YKR011C	Q02209	353 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	UBX5	Q06682	500 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	OSH2	Q12451	1283 aa		4.17	□□□□□ -1.74
UBP16	YPL072W	RAD4	P14736	754 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	ARE1	P25628	610 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	URA1	P28272	314 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP16	YPL072W	CTF8	P38877	133 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	CEP3	P40969	608 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	YLR040C	Q07988	224 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	MSD1	P15179	658 aa	Known RBP	4.16	□□□□□ -1.74
UBP16	YPL072W	HSP60	P19882	572 aa	Known RBP	4.16	□□□□□ -1.74
UBP16	YPL072W	RAD53	P22216	821 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	SEC21	P32074	935 aa	Known RBP	4.16	□□□□□ -1.74
UBP16	YPL072W	ERG5	P54781	538 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
UBP16	YPL072W	PEX19	Q07418	342 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	TAD3	Q9URQ3	322 aa		4.16	□□□□□ -1.74
UBP16	YPL072W	MPH2	P0CD99	609 aa		4.15	□□□□□ -1.75
UBP16	YPL072W	ERG4	P25340	473 aa		4.15	□□□□□ -1.75
UBP16	YPL072W	OAR1	P35731	278 aa		4.15	□□□□□ -1.75
UBP16	YPL072W	YJL049W	P47048	450 aa		4.15	□□□□□ -1.75
UBP16	YPL072W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
UBP16	YPL072W	YOL073C	Q08232	322 aa		4.15	□□□□□ -1.75
UBP16	YPL072W	ENV7	Q12003	364 aa		4.15	□□□□□ -1.75
UBP16	YPL072W	MOH1	P38191	138 aa		4.14	□□□□□ -1.75
UBP16	YPL072W	SUL1	P38359	859 aa		4.14	□□□□□ -1.75
UBP16	YPL072W	GIS1	Q03833	894 aa		4.14	□□□□□ -1.75
UBP16	YPL072W	RPS9A	O13516	197 aa	Known RBP	4.13	□□□□□ -1.75
UBP16	YPL072W	CIT1	P00890	479 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	TUB3	P09734	445 aa	Known RBP	4.13	□□□□□ -1.75
UBP16	YPL072W	TOP3	P13099	656 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	CTF13	P35203	478 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	UBP6	P43593	499 aa	Known RBP	4.13	□□□□□ -1.75
UBP16	YPL072W	TIM54	P47045	478 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	YGR125W	P53273	1036 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	SWM1	Q12379	170 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	TRM11	Q12463	433 aa		4.13	□□□□□ -1.75
UBP16	YPL072W	YHR020W	P38708	688 aa	Known RBP	4.12	□□□□□ -1.75
UBP16	YPL072W	YHR078W	P38799	552 aa		4.12	□□□□□ -1.75
UBP16	YPL072W	HUL4	P40985	892 aa		4.12	□□□□□ -1.75
UBP16	YPL072W	NIT3	P49954	291 aa		4.12	□□□□□ -1.75
UBP16	YPL072W	NOG2	P53742	486 aa	Known RBP	4.12	□□□□□ -1.75
UBP16	YPL072W	RNT1	Q02555	471 aa		4.12	□□□□□ -1.75
UBP16	YPL072W	TAF8	Q03750	510 aa		4.12	□□□□□ -1.75
UBP16	YPL072W	PPM2	Q08282	695 aa		4.12	□□□□□ -1.75
UBP16	YPL072W	PUS2	P53167	370 aa		4.11	□□□□□ -1.75
UBP16	YPL072W	YDL124W	Q07551	312 aa	Known RBP	4.11	□□□□□ -1.75
UBP16	YPL072W	CYS3	P31373	394 aa	Known RBP	4.11	□□□□□ -1.75
UBP16	YPL072W	EMC3	P36039	253 aa		4.11	□□□□□ -1.75
UBP16	YPL072W	FLC1	Q08967	793 aa		4.11	□□□□□ -1.75
UBP16	YPL072W	TRM13	Q12383	476 aa		4.11	□□□□□ -1.75
UBP16	YPL072W	PPR1	P07272	904 aa	Predicted RBP	4.1	□□□□□ -1.75
UBP16	YPL072W	ALG7	P07286	448 aa		4.1	□□□□□ -1.75
UBP16	YPL072W	DAM1	P53267	343 aa		4.1	□□□□□ -1.75
UBP16	YPL072W	YGR283C	P53336	341 aa	Predicted RBP	4.1	□□□□□ -1.75
UBP16	YPL072W	DUS1	P53759	423 aa	Known RBP	4.1	□□□□□ -1.75
UBP16	YPL072W	OMS1	Q06668	471 aa		4.1	□□□□□ -1.75
UBP16	YPL072W	HAL9	Q12180	1030 aa		4.1	□□□□□ -1.75
UBP16	YPL072W	GYP8	P43570	497 aa		4.09	□□□□□ -1.75
UBP16	YPL072W	UBA2	P52488	636 aa		4.09	□□□□□ -1.75
UBP16	YPL072W	HUL5	P53119	910 aa		4.09	□□□□□ -1.75
UBP16	YPL072W	ASI2	P53895	289 aa		4.09	□□□□□ -1.75
UBP16	YPL072W	TOM70	P07213	617 aa	Known RBP	4.08	□□□□□ -1.76
UBP16	YPL072W	MET3	P08536	511 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	PRP4	P20053	465 aa	Known RBP	4.08	□□□□□ -1.76
UBP16	YPL072W	DAL7	P21826	554 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	BET3	P36149	193 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	RPP1	P38786	293 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	GGA2	P38817	585 aa	Known RBP	4.08	□□□□□ -1.76
UBP16	YPL072W	RSP5	P39940	809 aa	Known RBP	4.08	□□□□□ -1.76
UBP16	YPL072W	VHR1	P40522	640 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	DLT1	Q04216	342 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	ACF2	Q12168	779 aa		4.08	□□□□□ -1.76
UBP16	YPL072W	ELO3	P40319	345 aa		4.07	□□□□□ -1.76
UBP16	YPL072W	TAD1	P53065	400 aa		4.07	□□□□□ -1.76
UBP16	YPL072W	REH1	Q06709	432 aa		4.07	□□□□□ -1.76
UBP16	YPL072W	MCH5	Q08777	521 aa		4.07	□□□□□ -1.76
UBP16	YPL072W	YOR022C	Q12204	715 aa		4.07	□□□□□ -1.76
UBP16	YPL072W	CAN1	P04817	590 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	PZF1	P39933	429 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	ALG2	P43636	503 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	STB4	P50104	949 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	RTA1	P53047	317 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	MRPS35	P53292	345 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	TIM44	Q01852	431 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	PKH1	Q03407	766 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	LRS4	Q04087	347 aa	Known RBP	4.06	□□□□□ -1.76
UBP16	YPL072W	BDF2	Q07442	638 aa		4.06	□□□□□ -1.76
UBP16	YPL072W	FRE5	Q08908	694 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms