RNA–Protein interactions for RNA: YOR386W

PHR1, Transcript of DNA photolyase involved in photoreactivation, yeast

Gene PHR1, Length 1,698 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHR1	YOR386W	YJL049W	P47048	450 aa		4.31	□□□□□ -1.72
PHR1	YOR386W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.31	□□□□□ -1.72	not detected
PHR1	YOR386W	SSL1	Q04673	461 aa	Predicted RBP	4.31	□□□□□ -1.72
PHR1	YOR386W	RPS9A	O13516	197 aa	Known RBP	4.3	□□□□□ -1.72
PHR1	YOR386W	FBP1	P09201	348 aa		4.3	□□□□□ -1.72
PHR1	YOR386W	HSP60	P19882	572 aa	Known RBP	4.3	□□□□□ -1.72
PHR1	YOR386W	SDP1	P40479	209 aa		4.3	□□□□□ -1.72
PHR1	YOR386W	NIT3	P49954	291 aa		4.3	□□□□□ -1.72
PHR1	YOR386W	SLI1	P53304	468 aa		4.3	□□□□□ -1.72
PHR1	YOR386W	YKR011C	Q02209	353 aa		4.3	□□□□□ -1.72
PHR1	YOR386W	BUL2	Q03758	920 aa	Known RBP	4.3	□□□□□ -1.72
PHR1	YOR386W	PEX19	Q07418	342 aa		4.3	□□□□□ -1.72
PHR1	YOR386W	TRP4	P07285	380 aa	Predicted RBP	4.29	□□□□□ -1.72
PHR1	YOR386W	RAD4	P14736	754 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	PET10	P36139	283 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	HUL4	P40985	892 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	UBX5	Q06682	500 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	SWM1	Q12379	170 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	HBN1	Q96VH4	193 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	MPH2	P0CD99	609 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	RPD3	P32561	433 aa		4.29	□□□□□ -1.72
PHR1	YOR386W	YDL124W	Q07551	312 aa	Known RBP	4.29	□□□□□ -1.72
PHR1	YOR386W	ERG4	P25340	473 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	URA1	P28272	314 aa	Predicted RBP	4.28	□□□□□ -1.72
PHR1	YOR386W	SUL1	P38359	859 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	CTF8	P38877	133 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	TIM54	P47045	478 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	PUS2	P53167	370 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	YGR125W	P53273	1036 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	NOG2	P53742	486 aa	Known RBP	4.28	□□□□□ -1.72
PHR1	YOR386W	HDA1	P53973	706 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	LAS17	Q12446	633 aa		4.28	□□□□□ -1.72
PHR1	YOR386W	CIT1	P00890	479 aa		4.27	□□□□□ -1.73
PHR1	YOR386W	OAR1	P35731	278 aa		4.27	□□□□□ -1.73
PHR1	YOR386W	MSD1	P15179	658 aa	Known RBP	4.26	□□□□□ -1.73
PHR1	YOR386W	CYS3	P31373	394 aa	Known RBP	4.26	□□□□□ -1.73
PHR1	YOR386W	ERT1	P38140	529 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PHR1	YOR386W	RNT1	Q02555	471 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	YOL073C	Q08232	322 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	TAD3	Q9URQ3	322 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	SEC21	P32074	935 aa	Known RBP	4.26	□□□□□ -1.73
PHR1	YOR386W	NGG1	P32494	702 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	YHR078W	P38799	552 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	GGA2	P38817	585 aa	Known RBP	4.26	□□□□□ -1.73
PHR1	YOR386W	UBP6	P43593	499 aa	Known RBP	4.26	□□□□□ -1.73
PHR1	YOR386W	UBA2	P52488	636 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	DAM1	P53267	343 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	YLR040C	Q07988	224 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	ENV7	Q12003	364 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	TRM11	Q12463	433 aa		4.26	□□□□□ -1.73
PHR1	YOR386W	MET3	P08536	511 aa		4.25	□□□□□ -1.73
PHR1	YOR386W	RAD53	P22216	821 aa		4.25	□□□□□ -1.73
PHR1	YOR386W	CTF13	P35203	478 aa		4.25	□□□□□ -1.73
PHR1	YOR386W	TIM44	Q01852	431 aa		4.25	□□□□□ -1.73
PHR1	YOR386W	PPM2	Q08282	695 aa		4.25	□□□□□ -1.73
PHR1	YOR386W	MOH1	P38191	138 aa		4.24	□□□□□ -1.73
PHR1	YOR386W	BUL1	P48524	976 aa		4.24	□□□□□ -1.73
PHR1	YOR386W	FLC1	Q08967	793 aa		4.24	□□□□□ -1.73
PHR1	YOR386W	TOM70	P07213	617 aa	Known RBP	4.23	□□□□□ -1.73
PHR1	YOR386W	PZF1	P39933	429 aa		4.23	□□□□□ -1.73
PHR1	YOR386W	SLU7	Q02775	382 aa	Known RBP	4.23	□□□□□ -1.73
PHR1	YOR386W	GIS1	Q03833	894 aa		4.23	□□□□□ -1.73
PHR1	YOR386W	DLT1	Q04216	342 aa		4.23	□□□□□ -1.73
PHR1	YOR386W	ACF2	Q12168	779 aa		4.23	□□□□□ -1.73
PHR1	YOR386W	ALG7	P07286	448 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	TOP3	P13099	656 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	ERG5	P54781	538 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	TAF8	Q03750	510 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	YDR514C	Q04408	483 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	REH1	Q06709	432 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	PPR1	P07272	904 aa	Predicted RBP	4.22	□□□□□ -1.73
PHR1	YOR386W	DAL7	P21826	554 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	EMC3	P36039	253 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	SAP190	P36123	1033 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	NNF1	P47149	201 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	DUS1	P53759	423 aa	Known RBP	4.22	□□□□□ -1.73
PHR1	YOR386W	PKH1	Q03407	766 aa		4.22	□□□□□ -1.73
PHR1	YOR386W	PRC1	P00729	532 aa		4.21	□□□□□ -1.74
PHR1	YOR386W	TUB3	P09734	445 aa	Known RBP	4.21	□□□□□ -1.74
PHR1	YOR386W	RPP1	P38786	293 aa		4.21	□□□□□ -1.74
PHR1	YOR386W	VHR1	P40522	640 aa		4.21	□□□□□ -1.74
PHR1	YOR386W	HUL5	P53119	910 aa		4.21	□□□□□ -1.74
PHR1	YOR386W	YGR283C	P53336	341 aa	Predicted RBP	4.21	□□□□□ -1.74
PHR1	YOR386W	OMS1	Q06668	471 aa		4.21	□□□□□ -1.74
PHR1	YOR386W	MCH5	Q08777	521 aa		4.21	□□□□□ -1.74
PHR1	YOR386W	CAF20	P12962	161 aa	Known RBP	4.2	□□□□□ -1.74
PHR1	YOR386W	RSP5	P39940	809 aa	Known RBP	4.2	□□□□□ -1.74
PHR1	YOR386W	ALG2	P43636	503 aa		4.2	□□□□□ -1.74
PHR1	YOR386W	ZDS1	P50111	915 aa	Known RBP	4.2	□□□□□ -1.74
PHR1	YOR386W	RSC3	Q06639	885 aa		4.2	□□□□□ -1.74
PHR1	YOR386W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PHR1	YOR386W	GAL11	P19659	1081 aa		4.19	□□□□□ -1.74
PHR1	YOR386W	YHR020W	P38708	688 aa	Known RBP	4.19	□□□□□ -1.74
PHR1	YOR386W	ELO3	P40319	345 aa		4.19	□□□□□ -1.74
PHR1	YOR386W	STU2	P46675	888 aa		4.19	□□□□□ -1.74
PHR1	YOR386W	SSY5	P47002	699 aa		4.19	□□□□□ -1.74
PHR1	YOR386W	DAS1	P47005	663 aa		4.19	□□□□□ -1.74
PHR1	YOR386W	AMA1	P50082	593 aa		4.19	□□□□□ -1.74
PHR1	YOR386W	ASI2	P53895	289 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms