RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	SPO75	Q07798	868 aa		4.59	□□□□□ -1.67
RPA43	YOR340C	FPR3	P38911	411 aa	Known RBP	4.58	□□□□□ -1.68
RPA43	YOR340C	TPO2	P53283	614 aa		4.58	□□□□□ -1.68
RPA43	YOR340C	ESC8	Q08119	714 aa		4.58	□□□□□ -1.68
RPA43	YOR340C	FLC1	Q08967	793 aa		4.58	□□□□□ -1.68
RPA43	YOR340C	SVS1	Q12254	260 aa		4.58	□□□□□ -1.68
RPA43	YOR340C	OSH2	Q12451	1283 aa		4.58	□□□□□ -1.68
RPA43	YOR340C	BI4	P03879	638 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	GAL11	P19659	1081 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	GAS1	P22146	559 aa	Known RBP	4.57	□□□□□ -1.68
RPA43	YOR340C	RPL8B	P29453	256 aa	Known RBP	4.57	□□□□□ -1.68
RPA43	YOR340C	PPH3	P32345	308 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	YKL222C	P35995	705 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	RFC5	P38251	354 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	SEC26	P41810	973 aa	Known RBP	4.57	□□□□□ -1.68
RPA43	YOR340C	PFD1	P46988	109 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	YGR125W	P53273	1036 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	DUS3	Q06053	668 aa	Known RBP	4.57	□□□□□ -1.68
RPA43	YOR340C	YDR306C	Q06640	478 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	FMP25	Q08023	583 aa		4.57	□□□□□ -1.68
RPA43	YOR340C	PHO8	P11491	566 aa		4.56	□□□□□ -1.68
RPA43	YOR340C	AAR2	P32357	355 aa	Predicted RBP	4.56	□□□□□ -1.68
RPA43	YOR340C	TAF5	P38129	798 aa		4.56	□□□□□ -1.68
RPA43	YOR340C	RSP5	P39940	809 aa	Known RBP	4.56	□□□□□ -1.68
RPA43	YOR340C	SAH1	P39954	449 aa	Known RBP	4.56	□□□□□ -1.68
RPA43	YOR340C	ALR2	P43553	858 aa		4.56	□□□□□ -1.68
RPA43	YOR340C	ERP6	P53198	216 aa		4.56	□□□□□ -1.68
RPA43	YOR340C	ENV11	P53246	860 aa		4.56	□□□□□ -1.68
RPA43	YOR340C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RPA43	YOR340C	SRP1	Q02821	542 aa	Known RBP	4.56	□□□□□ -1.68
RPA43	YOR340C	YIL177C	P40434	1758 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	YJL225C	P40889	1758 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	CIT1	P00890	479 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	MET6	P05694	767 aa	Known RBP	4.55	□□□□□ -1.68
RPA43	YOR340C	ERR1	P0CX10	437 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	ERR2	P0CX11	437 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	HSP60	P19882	572 aa	Known RBP	4.55	□□□□□ -1.68
RPA43	YOR340C	ARE1	P25628	610 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	ETP1	P38748	585 aa	Known RBP	4.55	□□□□□ -1.68
RPA43	YOR340C	CHZ1	P40019	153 aa	Predicted RBP	4.55	□□□□□ -1.68
RPA43	YOR340C	RRT14	P40470	206 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RPA43	YOR340C	RSM24	Q03976	319 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	HRQ1	Q05549	1077 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	EAF1	Q06337	982 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	YLR125W	Q12138	136 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	YDL177C	Q12257	170 aa		4.55	□□□□□ -1.68
RPA43	YOR340C	YRF1-2	P40105	1681 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	KIN2	P13186	1147 aa	Known RBP	4.54	□□□□□ -1.68
RPA43	YOR340C	ACE2	P21192	770 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	THI80	P35202	319 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	TAF8	Q03750	510 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	POB3	Q04636	552 aa	Known RBP	4.54	□□□□□ -1.68
RPA43	YOR340C	ATG13	Q06628	738 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	UBX5	Q06682	500 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	YOR352W	Q08816	343 aa		4.54	□□□□□ -1.68
RPA43	YOR340C	APL1	P27351	700 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	CDC12	P32468	407 aa	Known RBP	4.53	□□□□□ -1.68
RPA43	YOR340C	SCT1	P32784	759 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	GGA2	P38817	585 aa	Known RBP	4.53	□□□□□ -1.68
RPA43	YOR340C	CCC2	P38995	1004 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	MNN1	P39106	762 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	TAF1	P46677	1066 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	UTP8	P53276	713 aa	Known RBP	4.53	□□□□□ -1.68
RPA43	YOR340C	MDM38	Q08179	573 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	YLL058W	Q12198	575 aa		4.53	□□□□□ -1.68
RPA43	YOR340C	CAN1	P04817	590 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	THI4	P32318	326 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	CDC11	P32458	415 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	YKL151C	P36059	337 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	ESL2	P36168	1195 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	HFM1	P51979	1187 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	RTA1	P53047	317 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	SNO2	P53823	222 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	OSW2	Q12202	724 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	YRF1-3	P0CX14	1859 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	YRF1-7	P0CX15	1859 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	YRF1-6	P53819	1859 aa		4.52	□□□□□ -1.69
RPA43	YOR340C	URB1	P34241	1764 aa	Known RBP	4.51	□□□□□ -1.69
RPA43	YOR340C	FKS3	Q04952	1785 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	ADE8	P04161	214 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	CMP2	P14747	604 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	PRP6	P19735	899 aa	Predicted RBP	4.51	□□□□□ -1.69
RPA43	YOR340C	HBS1	P32769	611 aa	Known RBP	4.51	□□□□□ -1.69
RPA43	YOR340C	ABZ1	P37254	787 aa	Predicted RBP	4.51	□□□□□ -1.69
RPA43	YOR340C	YRO2	P38079	344 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	GIP4	P39732	760 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	HUL4	P40985	892 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	MRPL22	P53881	309 aa		4.51	□□□□□ -1.69
RPA43	YOR340C	CYC1	P00044	109 aa	Predicted RBP	4.5	□□□□□ -1.69
RPA43	YOR340C	FUN30	P31380	1131 aa		4.5	□□□□□ -1.69
RPA43	YOR340C	GIC1	P38785	314 aa		4.5	□□□□□ -1.69
RPA43	YOR340C	YJR142W	P47173	342 aa		4.5	□□□□□ -1.69
RPA43	YOR340C	SRT1	Q03175	343 aa		4.5	□□□□□ -1.69
RPA43	YOR340C	YDL124W	Q07551	312 aa	Known RBP	4.5	□□□□□ -1.69
RPA43	YOR340C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
RPA43	YOR340C	RIB2	Q12362	591 aa	Known RBP	4.5	□□□□□ -1.69
RPA43	YOR340C	ENT1	Q12518	454 aa		4.5	□□□□□ -1.69
RPA43	YOR340C	YGR161W-C	Q3E744	92 aa		4.5	□□□□□ -1.69
RPA43	YOR340C	BET3	P36149	193 aa		4.49	□□□□□ -1.69

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