RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W GZF3P42944 551 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W GPI8P49018 411 aa3.58□□□□□ -1.84
MSH2YOL090W YAP1802P53309 568 aa3.58□□□□□ -1.84
MSH2YOL090W RAT1Q02792 1006 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W ECM38Q05902 660 aaPredicted RBP3.58□□□□□ -1.84
MSH2YOL090W SPN1Q06505 410 aaPredicted RBP3.58□□□□□ -1.84
MSH2YOL090W ARO1P08566 1588 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W DAL1P32375 460 aa3.57□□□□□ -1.84
MSH2YOL090W PIN4P34217 668 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
MSH2YOL090W ERT1P38140 529 aa3.57□□□□□ -1.84
MSH2YOL090W BIT2P38346 545 aa3.57□□□□□ -1.84
MSH2YOL090W SKP1P52286 194 aa3.57□□□□□ -1.84
MSH2YOL090W HOS2P53096 452 aaPredicted RBP3.57□□□□□ -1.84
MSH2YOL090W CAF120P53836 1060 aa3.57□□□□□ -1.84
MSH2YOL090W YDR286CQ05530 114 aa3.57□□□□□ -1.84
MSH2YOL090W RGA2Q06407 1009 aa3.57□□□□□ -1.84
MSH2YOL090W AOS1Q06624 347 aa3.57□□□□□ -1.84
MSH2YOL090W YPR071WQ12346 211 aa3.57□□□□□ -1.84
MSH2YOL090W RKM4Q12504 494 aa3.57□□□□□ -1.84
MSH2YOL090W LEU1P07264 779 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W HVG1P0CE11 249 aa3.57□□□□□ -1.84
MSH2YOL090W GFA1P14742 717 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W AFT1P22149 690 aa3.57□□□□□ -1.84
MSH2YOL090W BRF1P29056 596 aa3.57□□□□□ -1.84
MSH2YOL090W MUD2P36084 527 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W RXT2P38255 430 aa3.57□□□□□ -1.84
MSH2YOL090W AIM46P38885 310 aa3.57□□□□□ -1.84
MSH2YOL090W PAP2P53632 584 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W ECM9Q02202 377 aa3.57□□□□□ -1.84
MSH2YOL090W SRP1Q02821 542 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W ARA2Q04212 335 aa3.57□□□□□ -1.84
MSH2YOL090W YDR338CQ05497 695 aa3.57□□□□□ -1.84
MSH2YOL090W YOR296WQ08748 1289 aa3.57□□□□□ -1.84
MSH2YOL090W PHR1P05066 565 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
MSH2YOL090W SPS1P08458 490 aa3.57□□□□□ -1.84
MSH2YOL090W MET8P15807 274 aa3.57□□□□□ -1.84
MSH2YOL090W SEC18P18759 758 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W MSM1P22438 575 aa3.57□□□□□ -1.84
MSH2YOL090W GSY1P23337 708 aa3.57□□□□□ -1.84
MSH2YOL090W AFR1P33304 620 aa3.57□□□□□ -1.84
MSH2YOL090W YEL1P34225 687 aa3.57□□□□□ -1.84
MSH2YOL090W YKL107WP34251 309 aa3.57□□□□□ -1.84
MSH2YOL090W MSC7P38694 644 aa3.57□□□□□ -1.84
MSH2YOL090W ALG2P43636 503 aa3.57□□□□□ -1.84
MSH2YOL090W NAM8Q00539 523 aaKnown RBP3.57□□□□□ -1.84
MSH2YOL090W TAF11Q04226 346 aa3.57□□□□□ -1.84
MSH2YOL090W PMT7Q06644 662 aa3.57□□□□□ -1.84
MSH2YOL090W OPY2Q06810 360 aa3.57□□□□□ -1.84
MSH2YOL090W BI4P03879 638 aa3.56□□□□□ -1.84
MSH2YOL090W YER152CP10356 443 aa3.56□□□□□ -1.84
MSH2YOL090W PPH3P32345 308 aa3.56□□□□□ -1.84
MSH2YOL090W MNN11P46985 422 aaKnown RBP3.56□□□□□ -1.84
MSH2YOL090W IML2P47031 731 aa3.56□□□□□ -1.84
MSH2YOL090W AIM14P53109 570 aa3.56□□□□□ -1.84
MSH2YOL090W CUS1Q02554 436 aaPredicted RBP3.56□□□□□ -1.84
MSH2YOL090W YOL114CQ12322 202 aa3.56□□□□□ -1.84
MSH2YOL090W PDR10P51533 1564 aa3.56□□□□□ -1.84
MSH2YOL090W RPS21AP0C0V8 87 aaKnown RBP3.56□□□□□ -1.84
MSH2YOL090W IDI1P15496 288 aa3.56□□□□□ -1.84
MSH2YOL090W PFK1P16861 987 aaKnown RBP3.56□□□□□ -1.84
MSH2YOL090W AAC3P18238 307 aa3.56□□□□□ -1.84
MSH2YOL090W DPH2P32461 534 aa3.56□□□□□ -1.84
MSH2YOL090W PET309P32522 965 aaPredicted RBP3.56□□□□□ -1.84
MSH2YOL090W KAP122P32767 1081 aa3.56□□□□□ -1.84
MSH2YOL090W DOM34P33309 386 aa3.56□□□□□ -1.84
MSH2YOL090W ASH1P34233 588 aa3.56□□□□□ -1.84
MSH2YOL090W YKL050CP35736 922 aa3.56□□□□□ -1.84
MSH2YOL090W EXO5P38289 585 aa3.56□□□□□ -1.84
MSH2YOL090W TPA1P40032 644 aaKnown RBP3.56□□□□□ -1.84
MSH2YOL090W GYP8P43570 497 aa3.56□□□□□ -1.84
MSH2YOL090W ENT3P47160 408 aa3.56□□□□□ -1.84
MSH2YOL090W ERO1Q03103 563 aa3.56□□□□□ -1.84
MSH2YOL090W TDA9Q04545 1251 aa3.56□□□□□ -1.84
MSH2YOL090W RSC58Q07979 502 aa3.56□□□□□ -1.84
MSH2YOL090W DPH6Q12429 685 aa3.56□□□□□ -1.84
MSH2YOL090W RMP1Q12530 201 aa3.56□□□□□ -1.84
MSH2YOL090W COX11P19516 300 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W MIH1P23748 554 aa3.55□□□□□ -1.84
MSH2YOL090W KRR1P25586 316 aaPredicted RBP3.55□□□□□ -1.84
MSH2YOL090W SIT1P39980 628 aa3.55□□□□□ -1.84
MSH2YOL090W CCT5P40413 562 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W YIL165CP40446 119 aa3.55□□□□□ -1.84
MSH2YOL090W GPD2P41911 440 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W CAF16P43569 289 aa3.55□□□□□ -1.84
MSH2YOL090W CNN1P43618 361 aa3.55□□□□□ -1.84
MSH2YOL090W YJR098CP47139 656 aa3.55□□□□□ -1.84
MSH2YOL090W TAD1P53065 400 aa3.55□□□□□ -1.84
MSH2YOL090W YGR250CP53316 781 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W NSE5Q03718 556 aa3.55□□□□□ -1.84
MSH2YOL090W SPC19Q03954 165 aa3.55□□□□□ -1.84
MSH2YOL090W ATG33Q06485 197 aa3.55□□□□□ -1.84
MSH2YOL090W RRP9Q06506 573 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W DED1P06634 604 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W AAD3P25612 363 aa3.55□□□□□ -1.84
MSH2YOL090W SYP1P25623 870 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W SMY2P32909 740 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W MCD4P36051 919 aa3.55□□□□□ -1.84
MSH2YOL090W TFA2P36145 328 aa3.55□□□□□ -1.84
MSH2YOL090W HXT6P39003 570 aaKnown RBP3.55□□□□□ -1.84
MSH2YOL090W HXT7P39004 570 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms