RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	PFK1	P16861	987 aa	Known RBP	3.98	□□□□□ -1.77
RIO2	YNL207W	SCT1	P32784	759 aa		3.98	□□□□□ -1.77
RIO2	YNL207W	AIM21	P40563	679 aa		3.98	□□□□□ -1.77
RIO2	YNL207W	IOC3	P43596	787 aa		3.98	□□□□□ -1.77
RIO2	YNL207W	SPO75	Q07798	868 aa		3.98	□□□□□ -1.77
RIO2	YNL207W	GUP2	Q08929	609 aa		3.98	□□□□□ -1.77
RIO2	YNL207W	ENV7	Q12003	364 aa		3.98	□□□□□ -1.77
RIO2	YNL207W	CIT1	P00890	479 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	RAD53	P22216	821 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	REC104	P33323	182 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	TIM54	P47045	478 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	ERG5	P54781	538 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	CTF4	Q01454	927 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	TAF8	Q03750	510 aa		3.97	□□□□□ -1.77
RIO2	YNL207W	HSP60	P19882	572 aa	Known RBP	3.96	□□□□□ -1.78
RIO2	YNL207W	ARE1	P25628	610 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	URA1	P28272	314 aa	Predicted RBP	3.96	□□□□□ -1.78
RIO2	YNL207W	HRR25	P29295	494 aa	Known RBP	3.96	□□□□□ -1.78
RIO2	YNL207W	SEC21	P32074	935 aa	Known RBP	3.96	□□□□□ -1.78
RIO2	YNL207W	CDC11	P32458	415 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	BET3	P36149	193 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	CTF8	P38877	133 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	SDP1	P40479	209 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	YJL049W	P47048	450 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	YKR011C	Q02209	353 aa		3.96	□□□□□ -1.78
RIO2	YNL207W	TUB3	P09734	445 aa	Known RBP	3.95	□□□□□ -1.78
RIO2	YNL207W	SED4	P25365	1065 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	UBP6	P43593	499 aa	Known RBP	3.95	□□□□□ -1.78
RIO2	YNL207W	NNF1	P47149	201 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	RTA1	P53047	317 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	HUL5	P53119	910 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	BDF2	Q07442	638 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	FLC1	Q08967	793 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	OSH2	Q12451	1283 aa		3.95	□□□□□ -1.78
RIO2	YNL207W	RFA1	P22336	621 aa	Known RBP	3.94	□□□□□ -1.78
RIO2	YNL207W	TYE7	P33122	291 aa	Predicted RBP	3.94	□□□□□ -1.78
RIO2	YNL207W	YIL108W	P40483	696 aa	Known RBP	3.94	□□□□□ -1.78
RIO2	YNL207W	GYP8	P43570	497 aa		3.94	□□□□□ -1.78
RIO2	YNL207W	YGR125W	P53273	1036 aa		3.94	□□□□□ -1.78
RIO2	YNL207W	MPH2	P0CD99	609 aa		3.93	□□□□□ -1.78
RIO2	YNL207W	PRP4	P20053	465 aa	Known RBP	3.93	□□□□□ -1.78
RIO2	YNL207W	EFT1	P32324	842 aa	Known RBP	3.93	□□□□□ -1.78
RIO2	YNL207W	RSP5	P39940	809 aa	Known RBP	3.93	□□□□□ -1.78
RIO2	YNL207W	CEP3	P40969	608 aa		3.93	□□□□□ -1.78
RIO2	YNL207W	TRM13	Q12383	476 aa		3.93	□□□□□ -1.78
RIO2	YNL207W	TRP4	P07285	380 aa	Predicted RBP	3.92	□□□□□ -1.78
RIO2	YNL207W	CAD1	P24813	409 aa	Known RBP	3.92	□□□□□ -1.78
RIO2	YNL207W	EMC3	P36039	253 aa		3.92	□□□□□ -1.78
RIO2	YNL207W	YGR283C	P53336	341 aa	Predicted RBP	3.92	□□□□□ -1.78
RIO2	YNL207W	VPS30	Q02948	557 aa		3.92	□□□□□ -1.78
RIO2	YNL207W	YLR040C	Q07988	224 aa		3.92	□□□□□ -1.78
RIO2	YNL207W	AIM39	Q08223	395 aa		3.92	□□□□□ -1.78
RIO2	YNL207W	PPM2	Q08282	695 aa		3.92	□□□□□ -1.78
RIO2	YNL207W	CAN1	P04817	590 aa		3.91	□□□□□ -1.78
RIO2	YNL207W	SNM1	P40993	198 aa		3.91	□□□□□ -1.78
RIO2	YNL207W	NSE3	Q05541	303 aa		3.91	□□□□□ -1.78
RIO2	YNL207W	YDL124W	Q07551	312 aa	Known RBP	3.91	□□□□□ -1.78
RIO2	YNL207W	HAL9	Q12180	1030 aa		3.91	□□□□□ -1.78
RIO2	YNL207W	YCL002C	P25565	263 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	CTF13	P35203	478 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	HUL4	P40985	892 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	TY4A-J	P47023	414 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
RIO2	YNL207W	MRPS35	P53292	345 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	DUS1	P53759	423 aa	Known RBP	3.9	□□□□□ -1.79
RIO2	YNL207W	LRS4	Q04087	347 aa	Known RBP	3.9	□□□□□ -1.79
RIO2	YNL207W	PEX19	Q07418	342 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	AIM44	Q99299	758 aa		3.9	□□□□□ -1.79
RIO2	YNL207W	RPS9A	O13516	197 aa	Known RBP	3.89	□□□□□ -1.79
RIO2	YNL207W	TOM70	P07213	617 aa	Known RBP	3.89	□□□□□ -1.79
RIO2	YNL207W	ERG4	P25340	473 aa		3.89	□□□□□ -1.79
RIO2	YNL207W	YHR078W	P38799	552 aa		3.89	□□□□□ -1.79
RIO2	YNL207W	NOG2	P53742	486 aa	Known RBP	3.89	□□□□□ -1.79
RIO2	YNL207W	YOL073C	Q08232	322 aa		3.89	□□□□□ -1.79
RIO2	YNL207W	DAL7	P21826	554 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	CYS3	P31373	394 aa	Known RBP	3.88	□□□□□ -1.79
RIO2	YNL207W	KTR4	P38131	464 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	OCA5	P38738	679 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	ALG2	P43636	503 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	HXT16	P47185	567 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	TAD1	P53065	400 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	ASI2	P53895	289 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	YOR022C	Q12204	715 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	GPR1	Q12361	961 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	TRM11	Q12463	433 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	YOR131C	Q12486	218 aa		3.88	□□□□□ -1.79
RIO2	YNL207W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
RIO2	YNL207W	GAL11	P19659	1081 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	MOH1	P38191	138 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	GGA2	P38817	585 aa	Known RBP	3.87	□□□□□ -1.79
RIO2	YNL207W	NIT3	P49954	291 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	MAL11	P53048	616 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	ATP25	Q03153	612 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	MUS81	Q04149	632 aa	Predicted RBP	3.87	□□□□□ -1.79
RIO2	YNL207W	THI21	Q08975	551 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	CDC53	Q12018	815 aa	Known RBP	3.87	□□□□□ -1.79
RIO2	YNL207W	YOL098C	Q12496	1037 aa		3.87	□□□□□ -1.79
RIO2	YNL207W	ERR1	P0CX10	437 aa		3.86	□□□□□ -1.79
RIO2	YNL207W	ERR2	P0CX11	437 aa		3.86	□□□□□ -1.79
RIO2	YNL207W	SRP40	P32583	406 aa	Predicted RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms