RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C NTO1Q12311 748 aa3.61□□□□□ -1.83
SSN8YNL025C RRI2Q12348 645 aa3.61□□□□□ -1.83
SSN8YNL025C OSH2Q12451 1283 aa3.61□□□□□ -1.83
SSN8YNL025C ADR1P07248 1323 aa3.61□□□□□ -1.83
SSN8YNL025C FOB1O13329 566 aa3.6□□□□□ -1.83
SSN8YNL025C RPP2AP05319 106 aaKnown RBP3.6□□□□□ -1.83
SSN8YNL025C SCT1P32784 759 aa3.6□□□□□ -1.83
SSN8YNL025C TIM23P32897 222 aa3.6□□□□□ -1.83
SSN8YNL025C RER2P35196 286 aa3.6□□□□□ -1.83
SSN8YNL025C YAP1801P38856 637 aa3.6□□□□□ -1.83
SSN8YNL025C MSE1P48525 536 aa3.6□□□□□ -1.83
SSN8YNL025C YGR237CP50089 785 aa3.6□□□□□ -1.83
SSN8YNL025C PSK2Q08217 1101 aa3.6□□□□□ -1.83
SSN8YNL025C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SSN8YNL025C FLC1Q08967 793 aa3.6□□□□□ -1.83
SSN8YNL025C HMI1Q12039 706 aa3.6□□□□□ -1.83
SSN8YNL025C PMA1P05030 918 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C RPL11AP0C0W9 174 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C YEF3P16521 1044 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C DCG1P32460 244 aa3.59□□□□□ -1.83
SSN8YNL025C PEX5P35056 612 aa3.59□□□□□ -1.83
SSN8YNL025C RSP5P39940 809 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C FAF1P40546 346 aaPredicted RBP3.59□□□□□ -1.83
SSN8YNL025C MCM6P53091 1017 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C PAP2P53632 584 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C UBX4P54730 416 aa3.59□□□□□ -1.83
SSN8YNL025C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SSN8YNL025C TIF35Q04067 274 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C YLR224WQ05947 369 aa3.59□□□□□ -1.83
SSN8YNL025C IMH1Q06704 911 aaKnown RBP3.59□□□□□ -1.83
SSN8YNL025C GRC3Q07845 632 aa3.59□□□□□ -1.83
SSN8YNL025C SNU66Q12420 587 aaPredicted RBP3.59□□□□□ -1.83
SSN8YNL025C TMA17Q12513 150 aa3.59□□□□□ -1.83
SSN8YNL025C RPL11BQ3E757 174 aaPredicted RBP3.59□□□□□ -1.83
SSN8YNL025C PGI1P12709 554 aaKnown RBP3.58□□□□□ -1.84
SSN8YNL025C DAL5P15365 543 aa3.58□□□□□ -1.84
SSN8YNL025C RPL8AP17076 256 aaKnown RBP3.58□□□□□ -1.84
SSN8YNL025C MSH2P25847 964 aa3.58□□□□□ -1.84
SSN8YNL025C CDC11P32458 415 aa3.58□□□□□ -1.84
SSN8YNL025C SLA2P33338 968 aa3.58□□□□□ -1.84
SSN8YNL025C UGA2P38067 497 aa3.58□□□□□ -1.84
SSN8YNL025C PNT1P38969 423 aa3.58□□□□□ -1.84
SSN8YNL025C SPF1P39986 1215 aaKnown RBP3.58□□□□□ -1.84
SSN8YNL025C IES5P40060 125 aa3.58□□□□□ -1.84
SSN8YNL025C PEA2P40091 420 aa3.58□□□□□ -1.84
SSN8YNL025C TYW3P53177 273 aa3.58□□□□□ -1.84
SSN8YNL025C YGR125WP53273 1036 aa3.58□□□□□ -1.84
SSN8YNL025C UGO1Q03327 502 aa3.58□□□□□ -1.84
SSN8YNL025C SND1Q04007 877 aa3.58□□□□□ -1.84
SSN8YNL025C TMA10Q06177 86 aa3.58□□□□□ -1.84
SSN8YNL025C OPI10Q08202 246 aa3.58□□□□□ -1.84
SSN8YNL025C CIT1P00890 479 aa3.57□□□□□ -1.84
SSN8YNL025C BI4P03879 638 aa3.57□□□□□ -1.84
SSN8YNL025C CDC34P14682 295 aa3.57□□□□□ -1.84
SSN8YNL025C HSP60P19882 572 aaKnown RBP3.57□□□□□ -1.84
SSN8YNL025C EMC1P25574 760 aa3.57□□□□□ -1.84
SSN8YNL025C CDC60P26637 1090 aaKnown RBP3.57□□□□□ -1.84
SSN8YNL025C APL2P36000 726 aaPredicted RBP3.57□□□□□ -1.84
SSN8YNL025C RIM4P38741 713 aa3.57□□□□□ -1.84
SSN8YNL025C MXR1P40029 184 aa3.57□□□□□ -1.84
SSN8YNL025C MND2P40577 368 aa3.57□□□□□ -1.84
SSN8YNL025C MET12P46151 657 aa3.57□□□□□ -1.84
SSN8YNL025C YGR053CP53234 283 aa3.57□□□□□ -1.84
SSN8YNL025C SLI1P53304 468 aa3.57□□□□□ -1.84
SSN8YNL025C CTF4Q01454 927 aa3.57□□□□□ -1.84
SSN8YNL025C RCF1Q03713 159 aa3.57□□□□□ -1.84
SSN8YNL025C YAP6Q03935 383 aa3.57□□□□□ -1.84
SSN8YNL025C ADY3Q07732 790 aa3.57□□□□□ -1.84
SSN8YNL025C SST2P11972 698 aaKnown RBP3.56□□□□□ -1.84
SSN8YNL025C DEF1P35732 738 aaKnown RBP3.56□□□□□ -1.84
SSN8YNL025C YKL050CP35736 922 aa3.56□□□□□ -1.84
SSN8YNL025C YHR020WP38708 688 aaKnown RBP3.56□□□□□ -1.84
SSN8YNL025C HUL4P40985 892 aa3.56□□□□□ -1.84
SSN8YNL025C HOS2P53096 452 aaPredicted RBP3.56□□□□□ -1.84
SSN8YNL025C YLR352WQ06479 807 aa3.56□□□□□ -1.84
SSN8YNL025C RRP6Q12149 733 aaKnown RBP3.56□□□□□ -1.84
SSN8YNL025C YLL058WQ12198 575 aa3.56□□□□□ -1.84
SSN8YNL025C HSP82P02829 709 aaKnown RBP3.55□□□□□ -1.84
SSN8YNL025C CDC31P06704 161 aaKnown RBP3.55□□□□□ -1.84
SSN8YNL025C HIS5P07172 385 aa3.55□□□□□ -1.84
SSN8YNL025C MPH2P0CD99 609 aa3.55□□□□□ -1.84
SSN8YNL025C PRI2P20457 528 aa3.55□□□□□ -1.84
SSN8YNL025C DBP2P24783 546 aaKnown RBP3.55□□□□□ -1.84
SSN8YNL025C LYP1P32487 611 aa3.55□□□□□ -1.84
SSN8YNL025C MCM7P38132 845 aa3.55□□□□□ -1.84
SSN8YNL025C CHS7P38843 316 aa3.55□□□□□ -1.84
SSN8YNL025C CHA4P43634 648 aa3.55□□□□□ -1.84
SSN8YNL025C HFM1P51979 1187 aa3.55□□□□□ -1.84
SSN8YNL025C PIP2P52960 996 aa3.55□□□□□ -1.84
SSN8YNL025C MTC3P53077 123 aa3.55□□□□□ -1.84
SSN8YNL025C GTF1P53260 183 aaPredicted RBP3.55□□□□□ -1.84
SSN8YNL025C SUN4P53616 420 aa3.55□□□□□ -1.84
SSN8YNL025C TLG1Q03322 224 aa3.55□□□□□ -1.84
SSN8YNL025C BUL2Q03758 920 aaKnown RBP3.55□□□□□ -1.84
SSN8YNL025C VIP1Q06685 1146 aaKnown RBP3.55□□□□□ -1.84
SSN8YNL025C TPO1Q07824 586 aa3.55□□□□□ -1.84
SSN8YNL025C NTG2Q08214 380 aa3.55□□□□□ -1.84
SSN8YNL025C FAP7Q12055 197 aaPredicted RBP3.55□□□□□ -1.84
SSN8YNL025C FAL1Q12099 399 aaKnown RBP3.55□□□□□ -1.84
SSN8YNL025C NUP145P49687 1317 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms